Gene Information

Name : SPUCDC_2348 (SPUCDC_2348)
Accession : YP_008481960.1
Strain : Salmonella enterica CDC1983-67
Genome accession: NC_022221
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2358107 - 2358724 bp
Length : 618 bp
Strand : +
Note : -

DNA sequence :
ATGCAACACCGACTCACAACCGAAATAACTCACTTTCTCTCTGAACTGCCTGAAGAGGAGAGGATCGCCGCCATTAATGA
ATTTAGAATGGCGATACATAGCGTTAGTCCTTTTCGCGATGAGCCTGTCGATTGTGTCCTGTGGGTGAAAAACGATCATA
TTTCACCTAATGACTACAACCCGAATAACGTTGCGCCGCCGGAGAAAAAACTGCTGCTTAAATCGATTGAACAAGATGGG
TTTACTCAGCCGATCGTGGTGGTAAAGGCCAATACGGAGGAGTACGAGATTGTAGACAGTTTTCACCGTCATGAGCTGGG
CAAAGGAAAAGCGGCCCTGAAAAGGCGTCTGAAAGGCTACCTGCCGATAACGTGTCTGGACAGAGAACGTCACGAACGCA
TGGCGGCAACCATTCGGCATAACCGCGCGCGCGGGCGCCACCAGATCCACGCCATGTCAGAAATCGTGCGCGAACTTTCT
CTGCTAGGCTGGGACGAGAGCAAAATCGGCCAGGAGTTAGGTATGGACGCCGATGAAGTCCTGCGCCTGAAACAGATCAA
CGGCCTGCAGGAGCTTTTTGCAGACCGTCGATTCTCCAGAGCGTGGACGGTTAAATAA

Protein sequence :
MQHRLTTEITHFLSELPEEERIAAINEFRMAIHSVSPFRDEPVDCVLWVKNDHISPNDYNPNNVAPPEKKLLLKSIEQDG
FTQPIVVVKANTEEYEIVDSFHRHELGKGKAALKRRLKGYLPITCLDRERHERMAATIRHNRARGRHQIHAMSEIVRELS
LLGWDESKIGQELGMDADEVLRLKQINGLQELFADRRFSRAWTVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1644 NP_287147.1 hypothetical protein Not tested TAI Protein 2e-54 61
Z1204 NP_286739.1 hypothetical protein Not tested TAI Protein 2e-54 61
z1204 CAD33764.1 Z1204 protein Not tested PAI I 536 Protein 2e-55 60
Z1644 AAQ19140.1 putative ParB-like nuclease Not tested PAI I CL3 Protein 1e-54 59
ibrB ADD91736.1 predicted transcriptional regulator IbrB Not tested PAI-I AL862 Protein 1e-54 59
ORF_30 AAZ04440.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 4e-42 57
APECO1_3503 YP_854305.1 hypothetical protein Not tested PAI I APEC-O1 Protein 5e-42 57
c5208 NP_757056.1 hypothetical protein Not tested PAI II CFT073 Protein 5e-42 57
STY4584 NP_458668.1 conserved hypothetical protein Not tested SPI-7 Protein 5e-55 56
t4278 NP_807876.2 hypothetical protein Not tested SPI-7 Protein 5e-55 55
ef0120 AAM75321.1 EF0120 Not tested Not named Protein 2e-31 51
EF0607 NP_814365.1 ParB-like nuclease domain-containing protein Not tested Not named Protein 3e-31 51
M5005_Spy_0164 YP_281528.1 parB-like nuclease Not tested Not named Protein 2e-30 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPUCDC_2348 YP_008481960.1 hypothetical protein VFG1505 Protein 7e-56 60