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Name : SPUCDC_1899 (SPUCDC_1899) Accession : YP_008481529.1 Strain : Salmonella enterica CDC1983-67 Genome accession: NC_022221 Putative virulence/resistance : Virulence Product : putative clpB-protease Function : - COG functional category : - COG ID : - EC number : - Position : 1892525 - 1895116 bp Length : 2592 bp Strand : + Note : - DNA sequence : ATGATCCAGATTGACTTAGCCACCCTGGTAAAACGGCTTGCTCCCTTCGCGAAACAGGCGCTGGAAGCGGCGGCGTCGGA GTGTATGAGCCAGCAGGCGGCAGAAATTACCGTCGCGCATGTGCTGCTACAGATGCTGGCGACCCCGCGCAGCGACTTTC GGGTGATTGCCGAACGTGCGGAGATCGGCGCCGATGATTTACGCCAGGCGCTGACGGTGGAAAATTACGCCACCGCCCGT TCATCCGACAGCTACCCGTCGTTTTCCCCGATGCTGGTTGAATGGCTGAAAGAGGCCTGGCTGCTGGCCTCCGCGGAAAT GCAGCAGACCGAACTGCGCGGCGGCGTGCTGCTGCTCGCCCTGCTGCATTCGCCGTTGCGCTACCTGCCGCCCGCCGCCG CCCGGTTGCTGACCGCCATCAACCGCGACCTGCTCCGGCAGGATTTTGCCGGGTGGACGAAGGAGTCCGCCGAATCGGTG ATCCTGAATGCGGACGGACAGACCGCCAGCGCCATAGCCGATACCGGCGACACCCTGCTGGCCCGCTATGCCAAAAACAT GACCGACGATGCCCGGCAGGGGCGGCTTGATCCGGTGCTGTGCCGCGATAACGAAATTGACCTGATGATCGATATCCTCT GCCGCCGCCGTAAAAATAATCCGGTGGTGGTGGGCGAAGCGGGCGTGGGCAAAAGCGCGCTGATTGAAGGGCTGGCGCTG CGCATTATTGCCGGTCAGGTGCCGGACAAACTGCGCGATACCGATATTATGACGCTGGATCTCGGCGCATTACAGGCGGG CGCGTCGGTGAAAGGTGAATTTGAGAAGCGCTTTAAGGGGCTGATGGCGGAAGTCATTCAGTCGCCGAAACCCGTCATCC TGTTTATCGACGAAGCCCACACGCTGATTGGCGCGGGCAACCAGCAGGGCGGGCTGGATATCTCCAACCTGCTCAAACCG GCACTGGCGCGCGGCGAGCTGAAAACCATCGCCGCCACCACCTGGAGCGAATACAAAAAATACTTCGAGAAAGACTCCGG CCTGTCGGCGGTGTATGAGCAGTCCCACGGCGTGCTGATTGACGATGAAGCCTTACAGGCCGCTGCGACGTTGAGCGAGC GCTACCTGTCAGGCCGCCAGTTGCCGGATAAGGCCATTGATGTGCTGGATACCGCCTGCGCCCGCGTGGCGATTAACCTC TCCTCGCCGCCGAGACAAATCTCGGCGCTGACCACCCTGCGCCAGCAGTGTGAAGCGGAAATCCGCCAGCTTGAGCGTGA GATCCGTATTGGCCTGCGGTCGGACACCTCACGGCTAAACGAGGTTCTGGCGCAGTATGACGAAACGCTGAGCGAACTGG ATGCGCTGGAGGCCGCGTGGCGCCAGCAGCAGACGCTGGTGCAGGAGATTATCGCGCTGCGTAAGGGGCTGCTGGACGAA ACGGACGCTACCGGCAACGACGAAACCGCAACGCCTGAAACAGAGGCGGTGGGCAGTGACGATGAATCCGTCACAGCGCC GCCGGAAGCGGAACCGGAAATTTCGCCAGCCGCCCGCCTCGCGCAGCTCACCGCCGAACTGGACGCCCTGCACCACACGC AGCTGCTGGTCTCCCCACACGTCGATAAAAAACAGATAGCCAGCGTGATTGCCGAATGGACCGGCGTGCCGCTTAACCGC CTGTCACAAAACGAAATGTCGGTCATCACCGACCTGCCGCAGTGGCTGGGCGACACCATTAAAGGCCAGGCGCTGGCGAT TAAGCACCTGCACAAACACCTGCTGACCGCCCGCGCCGATCTGCGCCGTCCGGGACGCCCGCTCGGCGCGTTCCTGCTGG CCGGTCCCAGCGGTGTCGGCAAAACCGAAACCGTGCTGCAACTGGCCGAACTGCTCTACGGCGGTCGCCAGTACCTGACC ACCATCAATATGTCGGAGTTTCAGGAGAAACACACCGTTTCACGCCTGATTGGTTCGCCGCCGGGCTATGTCGGCTACGG CGAGGGCGGCGTGCTGACCGAAGCGATTCGTCAGAAACCGTACTCCGTGGTGCTGCTCGACGAGGTGGAGAAAGCCCACC CGGACGTGCTCAACCTGTTCTACCAGGCGTTCGACAAGGGCGAGATGGCCGATGGCGAAGGGCGTCTTATCGACTGTAAA AATGTGGTGTTCTTCCTCACCTCCAACCTCGGCTATCAGGTGATTGTCGAACATGCCGACAACCCGGAAGCCATGCAGGA AGCGCTGTACCCGGTACTGGCGGACTTCTTTAAACCGGCGCTGCTGGCGCGGCTGGACAACGTACTGCGCGCCCGCTTCG GCGCGGAGGTGGTGATTGAGCCGGAGGTGACCGACGAAATCATGCAGCGCGTCACCCGCGCCGAAAACGGCGCGCGGATG CTGGAGTCGGTCATCGACGGCGAGATGCTGCCGCCGCTCTCCCTGCTGCTGTTGCAGAAAATGGCGGCGAATATCGCCAT TGCCCGTATCACGCTGGGCGTGGCAAACGGCGCGTTTACCGCGGATGTGGAGGATGTGCCGGATGAGGATACTCAGCCCG TAGCGGAAGCAGAGGACGAAGCCGTTCTATGA Protein sequence : MIQIDLATLVKRLAPFAKQALEAAASECMSQQAAEITVAHVLLQMLATPRSDFRVIAERAEIGADDLRQALTVENYATAR SSDSYPSFSPMLVEWLKEAWLLASAEMQQTELRGGVLLLALLHSPLRYLPPAAARLLTAINRDLLRQDFAGWTKESAESV ILNADGQTASAIADTGDTLLARYAKNMTDDARQGRLDPVLCRDNEIDLMIDILCRRRKNNPVVVGEAGVGKSALIEGLAL RIIAGQVPDKLRDTDIMTLDLGALQAGASVKGEFEKRFKGLMAEVIQSPKPVILFIDEAHTLIGAGNQQGGLDISNLLKP ALARGELKTIAATTWSEYKKYFEKDSGLSAVYEQSHGVLIDDEALQAAATLSERYLSGRQLPDKAIDVLDTACARVAINL SSPPRQISALTTLRQQCEAEIRQLEREIRIGLRSDTSRLNEVLAQYDETLSELDALEAAWRQQQTLVQEIIALRKGLLDE TDATGNDETATPETEAVGSDDESVTAPPEAEPEISPAARLAQLTAELDALHHTQLLVSPHVDKKQIASVIAEWTGVPLNR LSQNEMSVITDLPQWLGDTIKGQALAIKHLHKHLLTARADLRRPGRPLGAFLLAGPSGVGKTETVLQLAELLYGGRQYLT TINMSEFQEKHTVSRLIGSPPGYVGYGEGGVLTEAIRQKPYSVVLLDEVEKAHPDVLNLFYQAFDKGEMADGEGRLIDCK NVVFFLTSNLGYQVIVEHADNPEAMQEALYPVLADFFKPALLARLDNVLRARFGAEVVIEPEVTDEIMQRVTRAENGARM LESVIDGEMLPPLSLLLLQKMAANIAIARITLGVANGAFTADVEDVPDEDTQPVAEAEDEAVL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 0.0 | 81 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 0.0 | 81 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 2e-102 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SPUCDC_1899 | YP_008481529.1 | putative clpB-protease | VFG2084 | Protein | 0.0 | 55 |
