Gene Information

Name : SPUCDC_1893 (SPUCDC_1893)
Accession : YP_008481523.1
Strain : Salmonella enterica CDC1983-67
Genome accession: NC_022221
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1885678 - 1887531 bp
Length : 1854 bp
Strand : +
Note : -

DNA sequence :
ATGGAATTCGAAGAACGCTATTACAGGCAGGAGTTGGATCACCTGCGGCAGTTGAGCAAGCTGCTGGCGACCGAAAAGCC
GCATCTGGCCCGGTTTCTGGCAGAAAAAGAGGCCGATCCGGATATCGAGCGTCTGCTGGAGGGCGTGGCCTTTCTGACCG
GCAATCTGCGCCAGAAAATCGAGGATGAGTTTCCGGAGCTGACGCACGGACTGATCCGGATGCTGTGGCCCAATTATCTG
CGCCCGGTGCCGTCGATGACGCTGATTGAATATACGCCGGATATGGATAAAACTTCCGTGCCGGTACTGATCCCCCGTAA
TGAGCAGTTCACAACCGGGGCGAAGGGGACTCAGGGAAACCCGGTATTGTCTGCGTATTCCGGCAATGAGCACGATGTAG
CCCCGCCCTGTACGTTCACCCTGTGCCGGGATATCTGGCTGTTACCCGTTCAACTGGATCAGGTTGAAAATCGCAGTACG
CCCCGCCACGGCATTATTGATATTACGTTTGCCGTCGCACCGGGCACTGATTTTGCCACGCTGGATCTGAACAGGCTGCG
CTTCTGGCTGGGCAACGATGATAACTATACCCGCTATCAGCTTTATCTGTGGTTTTGTGAATATTTACAGGGCGCAGAGT
TGATGGCGGGCGGGCAGTCGATCCCGATGCCTGAATTTATGCTGAAAGCGGTGGGTTTTGAGTCAGAGGACGCCATGCTG
CCCTGGCCCGGCAATGTCCACAGCGGCTACCGCATTCTCCAGGAGTTTTTCTGCTACGCCGACAGTTTTCTGTTTTTCGA
TGCCTGTGGCATTCCGGCATTGCCAGACAGGTTAAAGGAGAACCGTTTCACTCTGCGGCTGCGGTTTTCTCGCCCCTTAC
CGGCAGATATCCGGCTGCGGGATGATTCCCTGCGCTTATATTGTGCGCCCGCCATTAATCTGTTTTCCCACCATGCCGAA
GCCATCACGCTGGATCATCAGCGGCAGGATTACGCTCTGGTTCCCAGCCGTCATTTTCCGGATCATTACGACATTTTTTC
GGTTAACAGCGTGGTGAGTCAGACGCAGGGGAAGCAGAGAAAAGCGGATCTTGGACGGCCGGTGATCACAGAGGCCGCGC
GCCACTGGCCTGCTTTTGAGAGTTTCCGCCACCAGATGGAGTACAGCCGTAAGCGGGAAGTGGTCTACTGGCAGCACCGG
ACCAGGACCTCGCTGTTTCACCGGGGCTTTGATCATACCCTGGCTTTTATTCATGCCGATGGCAGCCTCCCGGATGCCTC
ACTGCTTAATAATGAAGTGGTTTCTGTATCGCTGACCTGCACCAACCGGGAGCTGCCGGTACAGCTACGGCCCGGCGATA
TCACCGGTACGACAGGTAAAAACGCGTCGGTGGCGTCATTTCGCAATATCACCCGCCCCACCAGACCGCTCTGGCCGGTG
ATTGACGGCAGCCTGCACTGGTCGTTGCTGTCTGCCATGAACCTGAATTATCTGTCGTTGCTGGATGCTGATGCGCTCAA
ACAGGTGATCGCCAATTTTGATCGCCACGCCATCCATCATCCGCAGATGGCCCGTCTGTCACAGCAGAAGCTGGACGCCA
TTGAACGGCTGGAAACAACCCCGGTTGATCGCCTGTTTACCGGCATACCGGTGCGCGGGCTGGCGTCCACCCTGTCCATT
CATACGGAGCCGTTTGTCTGCGAGGGTGAAATGTACCTGCTGGGCGCGGTGCTGTCGCATTTTCTGTCGCTGTACGCCAT
CGTCAATTCGTTCCACATGCTGACCGTCGTTAACACGGAAAGCCAGGAGTCATGGAAATGGGCGGAAAGAACCGGGCAAC
ACCCGCTCATCTGA

Protein sequence :
MEFEERYYRQELDHLRQLSKLLATEKPHLARFLAEKEADPDIERLLEGVAFLTGNLRQKIEDEFPELTHGLIRMLWPNYL
RPVPSMTLIEYTPDMDKTSVPVLIPRNEQFTTGAKGTQGNPVLSAYSGNEHDVAPPCTFTLCRDIWLLPVQLDQVENRST
PRHGIIDITFAVAPGTDFATLDLNRLRFWLGNDDNYTRYQLYLWFCEYLQGAELMAGGQSIPMPEFMLKAVGFESEDAML
PWPGNVHSGYRILQEFFCYADSFLFFDACGIPALPDRLKENRFTLRLRFSRPLPADIRLRDDSLRLYCAPAINLFSHHAE
AITLDHQRQDYALVPSRHFPDHYDIFSVNSVVSQTQGKQRKADLGRPVITEAARHWPAFESFRHQMEYSRKREVVYWQHR
TRTSLFHRGFDHTLAFIHADGSLPDASLLNNEVVSVSLTCTNRELPVQLRPGDITGTTGKNASVASFRNITRPTRPLWPV
IDGSLHWSLLSAMNLNYLSLLDADALKQVIANFDRHAIHHPQMARLSQQKLDAIERLETTPVDRLFTGIPVRGLASTLSI
HTEPFVCEGEMYLLGAVLSHFLSLYAIVNSFHMLTVVNTESQESWKWAERTGQHPLI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_1761 YP_851424.1 hypothetical protein Not tested PAI II APEC-O1 Protein 0.0 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPUCDC_1893 YP_008481523.1 hypothetical protein VFG2078 Protein 4e-124 43