Gene Information

Name : SPUCDC_1889 (SPUCDC_1889)
Accession : YP_008481519.1
Strain : Salmonella enterica CDC1983-67
Genome accession: NC_022221
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1882994 - 1883497 bp
Length : 504 bp
Strand : +
Note : -

DNA sequence : 
ATGAGCAAAGATTATAACGGCAGCGTGGCACCCAAAGAACGCATTAATATTTCTTACATTCCAAAAACGGACGGTGAGCC
TTCTGAGGTGGAATTACCCCTTAATATGTTGATAGTGGGGGATACCGGAAACTCACAGGAAACAGCGCCACTTGATGAAC
GCCAGATGGTTTCTATCGACAAACATTCATTCAATTCAGTGATGGCAGAAGCGTCCATTAGCCTGAATTTTGCAGTTCCG
GCATCATTGAAGGACGACGCAAAAGATGGCGATGAGATGAATATCTCGCTGGAAATCAAATCCCTGAACGATTTTTCTCC
GGACAGCGTGGCAAAACAGGTACCGGAGTTGAACAAATTGCTGGAACTACGCGAAGCGCTGACAGCATTAAAAGGCCCGC
TCGGTAATCTGCCTGCATTTCGCGCCCAGCTTCAGGCATTGCTGGAAAATGAAGAATCCCGCGAACAGTTACTGCGGGAG
ATCAGCCAGGCAGAAAACCAGTAA

Protein sequence : 
MSKDYNGSVAPKERINISYIPKTDGEPSEVELPLNMLIVGDTGNSQETAPLDERQMVSIDKHSFNSVMAEASISLNFAVP
ASLKDDAKDGDEMNISLEIKSLNDFSPDSVAKQVPELNKLLELREALTALKGPLGNLPAFRAQLQALLENEESREQLLRE
ISQAENQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec17 YP_851427.1 hypothetical protein Not tested PAI II APEC-O1 Protein 9e-42 55
aec17 AAQ96711.1 Aec17 Not tested AGI-1 Protein 6e-42 55
HH0248 NP_859779.1 hypothetical protein Not tested HHGI1 Protein 2e-36 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPUCDC_1889 YP_008481519.1 hypothetical protein VFG2092 Protein 1e-41 57
SPUCDC_1889 YP_008481519.1 hypothetical protein VFG2474 Protein 1e-34 45