Gene Information

Name : SPUCDC_1877 (SPUCDC_1877)
Accession : YP_008481511.1
Strain : Salmonella enterica CDC1983-67
Genome accession: NC_022221
Putative virulence/resistance : Unknown
Product : putative transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1867430 - 1867729 bp
Length : 300 bp
Strand : -
Note : -

DNA sequence :
ATGACAAAACCAGCATCAACCACCAAAAAGCCACGCAAGCAGCACACGCCTGAATTTCGTCAGGAAGCTCTGAAACTGGC
TGAACGCATTGGGGTGGCCGCTGCCGCCCGCGAACTTAACCTGTATGAATCACAGCTCTACAACTGGCGAAGCAAACAGC
AAAATCAGCTCTCTTCTTCTGAACGCGAGCAGGAGATGTCCGCTGAGATCGCCCGTCTGAAACGTCAACTGGCAGAACGG
GATGAGGAACTGGCCATTATCCAGAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGA

Protein sequence :
MTKPASTTKKPRKQHTPEFRQEALKLAERIGVAAAARELNLYESQLYNWRSKQQNQLSSSEREQEMSAEIARLKRQLAER
DEELAIIQKAATYFAKRLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECO111_3733 YP_003236069.1 putative IS3 transposase InsE Not tested LEE Protein 1e-35 88
unnamed AAC28568.1 YIS1_SHISO Not tested LEE Protein 7e-36 88
unnamed AAL57518.1 transposase 2 Not tested LEE Protein 7e-36 88
unnamed AAL57580.1 transposase 2 Not tested LEE Protein 7e-36 88
S4064 NP_839234.1 IS3 orfA Not tested SHI-2 Protein 1e-30 83
SF3703 NP_709442.1 IS3 ORF1 Not tested SHI-2 Protein 1e-30 83
unnamed AAT48700.1 transposon-related Not tested PAI II 4787 Protein 5e-30 83
yis1_SHISO CAD66178.1 hypothetical protein of insertion element IS1 Not tested PAI III 536 Protein 5e-30 83

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPUCDC_1877 YP_008481511.1 putative transposase VFG0603 Protein 4e-31 83
SPUCDC_1877 YP_008481511.1 putative transposase VFG1632 Protein 2e-30 83