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Name : ssaU (SPUCDC_1238) Accession : YP_008480909.1 Strain : Salmonella enterica CDC1983-67 Genome accession: NC_022221 Putative virulence/resistance : Virulence Product : putative type III secretion protein Function : - COG functional category : - COG ID : - EC number : - Position : 1266438 - 1267496 bp Length : 1059 bp Strand : + Note : - DNA sequence : ATGAGCGAGAAAACAGAACAGCCTACAGAAAAGAAATTACGTGATGGCCGTAAGGAAGGGCAGGTTGTCAAAAGTATTGA AATAACATCATTATTTCAGCTGATTGCGCTTTATTTGTATTTTCATTTCTTTACTGAAAAGATGATTTTGATACTGATTG AGTCAATAACTTTCACATTACAATTAGTAAATAAACCATTTTCTTATGCATTAACGCAATTGAGTCATGCTTTAATAGAG TCACTGACTTCTGCACTGCTGTTTCTGGGCGCTGGGGTAATAGTTGCTACTGTGGGTAGCGTGTTTCTTCAGGTGGGGGT GGTTATTGCCAGCAAGGCCATAGGTTTTAAAAGCGAGCATATAAATCCGGTAAGTAATTTTAAGCAGATATTCTCTTTAC ATAGCGTAGTAGAATTATGTAAATCCAGCCTGAAAGTTATCATGCTATCTCTTATCTTTGCTTTTTTCTTTTATTATTAT GCCAGTACTTTTCGGGCGCTACCGTACTGTGGGTTAGCCTGTGGCCTGCTTGTGGTTTCTTCTTTAATAAAATGGTTATG GGTTGGGGTGATGGCTTTTTATATCGTCGTTGGCATACTGGACTATTCTTTTCAATATTATAAGATTAGAAAAGATCTAA AAATGAGTAAAGATGACGTAAAACAGGAGCATAAAGATCTGGAGGGCGATCCTCAAATGAAGACACGGCGTCGGGAAATG CAGAGTGAAATACAAAGTGGGAGTTTAGCTCAATCTGTTAAACAATCTGTTGCGGTAGTGCGTAATCCAACGCATATTGC GGTTTGTCTTGGCTATCATCCCACCGATATGCCAATACCACGCGTCCTGGAAAAAGGCAGTGATGCTCAAGCTAACTATA TTGTTAACATCGCTGAACGCAACTGCATCCCCGTTGTTGAAAATGTTGAGCTGGCCCGCTCATTATTTTTTGAAGTGGAA CGCGGAGATAAAATTCCTGAAACGTTATTTGAACCCGTTGCAGCCTTGTTACGTATGGTGATGAAGATAGATTATGCGCA TTCTACCGAAACACCATAA Protein sequence : MSEKTEQPTEKKLRDGRKEGQVVKSIEITSLFQLIALYLYFHFFTEKMILILIESITFTLQLVNKPFSYALTQLSHALIE SLTSALLFLGAGVIVATVGSVFLQVGVVIASKAIGFKSEHINPVSNFKQIFSLHSVVELCKSSLKVIMLSLIFAFFFYYY ASTFRALPYCGLACGLLVVSSLIKWLWVGVMAFYIVVGILDYSFQYYKIRKDLKMSKDDVKQEHKDLEGDPQMKTRRREM QSEIQSGSLAQSVKQSVAVVRNPTHIAVCLGYHPTDMPIPRVLEKGSDAQANYIVNIAERNCIPVVENVELARSLFFEVE RGDKIPETLFEPVAALLRMVMKIDYAHSTETP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ssaU | CAA68202.1 | secretion system apparatus, SsaU | Virulence | SPI-2 | Protein | 1e-158 | 99 |
| ssaU | NP_805093.1 | secretion system apparatus protein SsaU | Virulence | SPI-2 | Protein | 9e-159 | 99 |
| ssaU | YP_216430.1 | secretion system apparatus protein SsaU | Virulence | SPI-2 | Protein | 8e-158 | 99 |
| ssaU | NP_460387.1 | secretion system apparatus protein SsaU | Virulence | SPI-2 | Protein | 2e-158 | 99 |
| ssaU | NP_456106.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 9e-159 | 99 |
| YPO0273 | YP_002345355.1 | secretion system apparatus protein SsaU | Virulence | Not named | Protein | 2e-72 | 49 |
| escU | AFO66307.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 2e-51 | 41 |
| escU | AFO66403.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 2e-51 | 41 |
| escU | AAK26703.1 | EscU | Virulence | LEE | Protein | 1e-50 | 41 |
| escU | YP_003223487.1 | T3SS structure protein EscU | Virulence | LEE | Protein | 2e-50 | 41 |
| escU | AAL57530.1 | EscU | Virulence | LEE | Protein | 1e-50 | 41 |
| escU | YP_003232141.1 | secretion system apparatus protein SsaU | Virulence | LEE | Protein | 2e-50 | 41 |
| escU | CAI43886.1 | EscU protein | Virulence | LEE | Protein | 1e-50 | 41 |
| escU | YP_003236100.1 | T3SS structure protein EscU | Virulence | LEE | Protein | 8e-51 | 41 |
| escU | CAC81850.1 | EscU protein | Virulence | LEE II | Protein | 1e-50 | 41 |
| escU | AAC38372.1 | EscU | Virulence | LEE | Protein | 6e-51 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ssaU | YP_008480909.1 | putative type III secretion protein | VFG0522 | Protein | 6e-159 | 99 |
| ssaU | YP_008480909.1 | putative type III secretion protein | VFG0718 | Protein | 4e-51 | 41 |
