Gene Information

Name : ssaP (SPUCDC_1233)
Accession : YP_008480904.1
Strain : Salmonella enterica CDC1983-67
Genome accession: NC_022221
Putative virulence/resistance : Virulence
Product : putative type III secretion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1263393 - 1263734 bp
Length : 342 bp
Strand : +
Note : -

DNA sequence : 
TTGCCATGCCAGTCTTATCAGGATGATAACGAGGCGGAGGCGGAACGTATGGACTTTGAACAACTCATGCACCAGGCATT
ACCCATTGGTGAGAATAATCCTCCTGCAGCATTGAATAAGAACGTGGTTTTCACGCAACGTTATCGTGTTAGTGGCGGTT
ATCTTGACGGTGTAGAGTGTGAAGTCTGTGAATCAGGGGGGCTAATTCAGTTAAGAATCAATGTCCCTCATCATGAAATT
TACCGTTCGATGAAAGCGCTAAAGCAGTGGCTGGAGTCTCAGTTGCTGCATATGGGGTATATAATTTCCCTGGAGATATT
CTATGTTAAGAATAGCGAATGA

Protein sequence : 
MPCQSYQDDNEAEAERMDFEQLMHQALPIGENNPPAALNKNVVFTQRYRVSGGYLDGVECEVCESGGLIQLRINVPHHEI
YRSMKALKQWLESQLLHMGYIISLEIFYVKNSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaP NP_456111.1 putative type III secretion protein Virulence SPI-2 Protein 1e-49 99
ssaP NP_805088.1 type III secretion protein Virulence SPI-2 Protein 1e-49 99
ssaP NP_460382.1 type III secretion system apparatus protein Virulence SPI-2 Protein 1e-49 99
ssaP CAA70539.1 secretion system apparatus Virulence SPI-2 Protein 8e-50 99
ssaP AAX49619.1 SsaP Virulence SPI-2 Protein 6e-40 99
ssaP YP_216425.1 secretion system apparatus protein SsaP Virulence SPI-2 Protein 5e-49 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ssaP YP_008480904.1 putative type III secretion protein VFG0517 Protein 3e-50 99