Gene Information

Name : ssaK (SPUCDC_1227)
Accession : YP_008480898.1
Strain : Salmonella enterica CDC1983-67
Genome accession: NC_022221
Putative virulence/resistance : Virulence
Product : putative pathogenicity island protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1257596 - 1258270 bp
Length : 675 bp
Strand : +
Note : -

DNA sequence : 
ATGAGTTTTACTTCACTTCCTCTGACGGAAATTAACCATAAGCTACCCGCTCGAAATATTATTGAGTCACAGTGGATAAT
ATTACAATTAACTTTATTTGCGCAAGAGCAACAAGCTAAGAGAGTTTCACATGCTATTGTGAGCTCCGCTTACCGTAAGG
CTGAAAAAATCATCCGAGACGCCTATCGTTATCAGCGTGAACAGAAAGTTGAGCAGCAACAAGAACTAGCGTGCTTGCGT
AAAAATACGCTGGAAAAAATGGAAGTGGAATGGCTGGAACAGCATGTAAAACATTTACAAGAAGATGAAAATCAATTTCG
TTCATTGGTCGATCACGCAGCGCATCATATTAAAAATAGTATAGAACAGGTTCTGTTGGCCTGGTTCGACCAACAGTCGG
TAGACAGTGTTATGTGCCATCGTCTGGCACGCCAGGCCACGGCTATGGCGGAAGAGGGAGCGCTTTATTTGCGTATTCAT
CCTGAAAAAGAGGCATTGATGCGTGAAACTTTTGGCAAGCGGTTTACGTTGATTATCGAGCCTGGTTTCTCTCCCGATCA
GGCTGAACTTTCCTCAACACGATATGCCGTTGAGTTTTCACTTTCTCGTCATTTCAACTCGTTACTGAAATGGTTACGTA
ATGGTGAAGATAAAAGAGGTAGCGATGAATATTAA

Protein sequence : 
MSFTSLPLTEINHKLPARNIIESQWIILQLTLFAQEQQAKRVSHAIVSSAYRKAEKIIRDAYRYQREQKVEQQQELACLR
KNTLEKMEVEWLEQHVKHLQEDENQFRSLVDHAAHHIKNSIEQVLLAWFDQQSVDSVMCHRLARQATAMAEEGALYLRIH
PEKEALMRETFGKRFTLIIEPGFSPDQAELSSTRYAVEFSLSRHFNSLLKWLRNGEDKRGSDEY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1709 NP_456117.1 putative pathogenicity island protein Virulence SPI-2 Protein 2e-99 99
t1279 NP_805082.1 pathogenicity island protein Not tested SPI-2 Protein 2e-99 99
ssaK NP_460376.1 type III secretion system apparatus protein Virulence SPI-2 Protein 7e-102 99
ssaK CAA70533.1 secretion system apparatus Virulence SPI-2 Protein 5e-101 99
ssaK YP_216419.1 secretion system apparatus protein SsaK Virulence SPI-2 Protein 2e-98 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ssaK YP_008480898.1 putative pathogenicity island protein VFG0511 Protein 3e-102 99