Gene Information

Name : sseB (SPUCDC_1214)
Accession : YP_008480885.1
Strain : Salmonella enterica CDC1983-67
Genome accession: NC_022221
Putative virulence/resistance : Virulence
Product : putative pathogenicity island effector effector protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1249941 - 1250531 bp
Length : 591 bp
Strand : +
Note : -

DNA sequence : 
ATGTCTTCAGGAAACATCTTATGGGGAAGTCAAAACCCTATTGTGTTTAAAAATAGCTTCGGCGTCAGCAACGCTGATAC
CGGGAGCCAGGATGACTTATCCCAGCAAAATCCGTTTGCCGAAGGGTATGGTGTTTTGCTTATTCTCCTTATGGCTATTC
AGGCTATCGCAAATAATAAATTTATTGAAGTCCAGAAGAACGCTGAACGTGCCAGAAATACCCAGGAAAAGTCAAATGAG
ATGGATGAGGTGATTGCTAAAGCAGCCAAAGGGGATGCTAAAACCAAAGAGGAGGTGCCTGAGGATGTAATTAAATACAT
GCGTGATAATGGTATTCTCATCGATGGTATGACCATTGATGATTATATGGTTAAATATGGCGATCATGGGAAGCTGGATA
AAGGTGGCCTACAGGCGATCAAAGCGGCTTTGGATAATGACGCCAACCGGAATACCGATCTTATGAGTCAGGGGCAGATA
ACAATTCAAAAAATGTCTCAGGAGCTTAACGCTGTCCTTACCCAACTGACAGGGCTTATCAGTAAGTGGGGGGAAATTTC
CAGTATGATAGCGCAGAAAACGTACTCATGA

Protein sequence : 
MSSGNILWGSQNPIVFKNSFGVSNADTGSQDDLSQQNPFAEGYGVLLILLMAIQAIANNKFIEVQKNAERARNTQEKSNE
MDEVIAKAAKGDAKTKEEVPEDVIKYMRDNGILIDGMTIDDYMVKYGDHGKLDKGGLQAIKAALDNDANRNTDLMSQGQI
TIQKMSQELNAVLTQLTGLISKWGEISSMIAQKTYS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sseB NP_456130.1 putative pathogenicity island effector effector protein Virulence SPI-2 Protein 1e-78 99
sseB NP_805069.1 pathogenicity island effector protein Virulence SPI-2 Protein 1e-78 99
sseB NP_460363.1 translocation machinery component Virulence SPI-2 Protein 1e-78 99
sseB AAC28879.1 putative secreted protein Virulence SPI-2 Protein 7e-79 99
sseB CAA12185.1 SseB Virulence SPI-2 Protein 7e-79 99
sseB YP_216406.1 secretion system effector protein SseB Virulence SPI-2 Protein 4e-78 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sseB YP_008480885.1 putative pathogenicity island effector effector protein VFG0499 Protein 3e-79 99