Gene Information

Name : SPUCDC_1208 (SPUCDC_1208)
Accession : YP_008480879.1
Strain : Salmonella enterica CDC1983-67
Genome accession: NC_022221
Putative virulence/resistance : Virulence
Product : putative transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1241328 - 1242056 bp
Length : 729 bp
Strand : -
Note : -

DNA sequence : 
ATGTCGTATTCTATAGGCGAATTTGCCAGACTATGCGGTATCAATGCCGCCACGCTAAGGGCATGGCAGCGACGCTATGG
TTTATTGAAACCGCAGCGTACTGATGGCGGGCATCGCTTATACAGCGATGACGATATTCGACAAGCGCTTAGCATCCTCG
ACTGGGTGAGAAAAGGCGTACCGATAAGCCAGGTCAAACCCTTACTGTCGCGTCCGGTCATTCGCCTGGGCGATAACTGG
ATAACGATCCAGGAGACGATGCTCCAACATCTCCACGAAGGGCGAATTGACGCGCTGCGGCAGTTGATTTATGACTGTGG
CCGGGAATATCCTCGCGCAGAACTGGTGACCCATTTATTGCGTCCGTTGCGCAGCAAAGTGTCCGCGCACCCTCCCGCCG
TGATGACGCTGCGCGAAATACTGGATGGCATCATTATTGCTTACACCTCTTTTTGCCTTGAAGGCGACAGAAAAGCGCCT
GGCAACAATGCCTTTATTAGCGGATGGCATCTCTCGGATCACTGTGAAATCTGGCTGGAAGCGTTGACTCGTACCGGACA
AGAGCTGCGGCTCAATGTGCTTCCCTCTCCACCAGCCGCGCTGGCGCCCGAGCTGTTCGCCCAGAGAAAATGGTTCCTGG
TGACCACCGGAAAGCTCACTGCCGGGCAGAAAAAACAGCTTGCCCAGTGGCGCAACGTGGTCGCTTCGCTGGAGGTTATC
ACGCTATAA

Protein sequence : 
MSYSIGEFARLCGINAATLRAWQRRYGLLKPQRTDGGHRLYSDDDIRQALSILDWVRKGVPISQVKPLLSRPVIRLGDNW
ITIQETMLQHLHEGRIDALRQLIYDCGREYPRAELVTHLLRPLRSKVSAHPPAVMTLREILDGIIIAYTSFCLEGDRKAP
GNNAFISGWHLSDHCEIWLEALTRTGQELRLNVLPSPPAALAPELFAQRKWFLVTTGKLTAGQKKQLAQWRNVVASLEVI
TL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1730 NP_456138.1 putative transcriptional regulator Not tested SPI-2 Protein 4e-101 99
t1258 NP_805061.1 transcriptional regulator Not tested SPI-2 Protein 4e-101 99
ORF 242 CAB37409.1 - Not tested SPI-2 Protein 1e-100 98
SC1411 YP_216398.1 MerR family transcriptional regulator Not tested SPI-2 Protein 4e-100 98
orf242 NP_460355.1 regulatory protein Not tested SPI-2 Protein 1e-100 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPUCDC_1208 YP_008480879.1 putative transcriptional regulator VFG0491 Protein 6e-101 98