Gene Information

Name : CARG_01840 (CARG_01840)
Accession : YP_008478149.1
Strain : Corynebacterium argentoratense DSM 44202
Genome accession: NC_022198
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 362442 - 363119 bp
Length : 678 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGAGTCCGAAACTATTGGTAGTTGATGACGATCCCGCGATCTCCGAAATGCTGACGCTTGTCCTGCAATCAGAGGGCTT
CGAGACCGTCGCGATCACCGATGGTGCTGAAGCGGTCGCTGCAGCAGAACGGGAACAACCCGACCTCATCCTGCTGGACC
TCATGCTTCCCGGAATGAACGGCATCGATATTTGCCGCGAAATCCGCAAAACCTCCTTCGTCCCGATCGTCATGTTGACA
GCAAAAACTGACACTGTTGACGTGGTTTTGGGGTTGGAATCCGGAGCAGACGATTACGTCAACAAGCCGTTCAAGCCCAA
GGAACTCATCGCGCGCATTCGCGCACGTCTGCGTCGCATCGAGGAAACCCCCAGCGAACTGATCGAACTTGGCGAACTGA
CCATCGACGTTCCTGGGCATATCGTTAAGCGTGACGGTAAAGAAATCCCCCTCACGCCTCTCGAATTTGATCTGCTGCTG
CACCTGGCTCGCAAACCCAACCAAGTATTCAGCCGCGAAGAGCTCCTGGAAAAGGTCTGGGGATACCGCCACGCATCAGA
CACACGCCTGGTCAACGTTCACGTCCAACGCTTGCGCGCGAAATTGGAACGCGACCCGGAAAACCCACAGATCGTGCTGA
CCGTCCGTGGACTGGGCTACAAGACGGTTCGCGCCTAA

Protein sequence : 
MSPKLLVVDDDPAISEMLTLVLQSEGFETVAITDGAEAVAAAEREQPDLILLDLMLPGMNGIDICREIRKTSFVPIVMLT
AKTDTVDVVLGLESGADDYVNKPFKPKELIARIRARLRRIEETPSELIELGELTIDVPGHIVKRDGKEIPLTPLEFDLLL
HLARKPNQVFSREELLEKVWGYRHASDTRLVNVHVQRLRAKLERDPENPQIVLTVRGLGYKTVRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 3e-39 43
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 6e-39 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CARG_01840 YP_008478149.1 hypothetical protein AE000516.2.gene3505. Protein 2e-70 69
CARG_01840 YP_008478149.1 hypothetical protein NC_002952.2859905.p0 Protein 1e-43 48
CARG_01840 YP_008478149.1 hypothetical protein NC_013450.8614421.p0 Protein 1e-43 48
CARG_01840 YP_008478149.1 hypothetical protein NC_007793.3914279.p0 Protein 1e-43 48
CARG_01840 YP_008478149.1 hypothetical protein NC_002745.1124361.p0 Protein 1e-43 48
CARG_01840 YP_008478149.1 hypothetical protein NC_009782.5559369.p0 Protein 1e-43 48
CARG_01840 YP_008478149.1 hypothetical protein NC_002951.3237708.p0 Protein 1e-43 48
CARG_01840 YP_008478149.1 hypothetical protein NC_007622.3794472.p0 Protein 1e-43 48
CARG_01840 YP_008478149.1 hypothetical protein NC_002758.1121668.p0 Protein 1e-43 48
CARG_01840 YP_008478149.1 hypothetical protein NC_009641.5332272.p0 Protein 1e-43 48
CARG_01840 YP_008478149.1 hypothetical protein NC_012469.1.7685629. Protein 7e-43 48
CARG_01840 YP_008478149.1 hypothetical protein NC_003923.1003749.p0 Protein 1e-43 47
CARG_01840 YP_008478149.1 hypothetical protein HE999704.1.gene2815. Protein 2e-39 47
CARG_01840 YP_008478149.1 hypothetical protein AE016830.1.gene1681. Protein 4e-39 42
CARG_01840 YP_008478149.1 hypothetical protein BAC0125 Protein 2e-28 42
CARG_01840 YP_008478149.1 hypothetical protein NC_012469.1.7686381. Protein 6e-39 41
CARG_01840 YP_008478149.1 hypothetical protein CP000675.2.gene1535. Protein 1e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CARG_01840 YP_008478149.1 hypothetical protein VFG1563 Protein 2e-39 43
CARG_01840 YP_008478149.1 hypothetical protein VFG1702 Protein 2e-39 42
CARG_01840 YP_008478149.1 hypothetical protein VFG1389 Protein 1e-26 42