|
Name : CARG_08955 (CARG_08955) Accession : YP_008479530.1 Strain : Corynebacterium argentoratense DSM 44202 Genome accession: NC_022198 Putative virulence/resistance : Virulence Product : protein disaggregation chaperone Function : - COG functional category : - COG ID : - EC number : - Position : 1866668 - 1869223 bp Length : 2556 bp Strand : - Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGGATACATTCACACCAACCACAAAAACCAACGAAGCTTTACAAGCCGCTTTGCAGCAGGCCAGCGCATTAGGAAACCC CGACATTCGCCCGGCCCACATACTGGTGGCCTTGCTTAAACAGCAAGATTCCATCGCTTACCCGGTGCTTAAAGCCGCAG GCGTTGAAGCTGATGCGGTGCTGGCCAAGGCGCAAGCACTTGTCGATTCTTACCCCAAAGCTCAAGGCTCCGGTATCGCG AAGCCCAACTTTAACCGTGACTGCCTCAACGCCTTTACCGCAGCTCAAGAGCTAGCCGGCGAGCTTGGCGACGAGTTTGT GTCCACCGAAGTCCTGCTTGCAGGTATTACGCGCGGAGAATCCGATGCGGCTAAAGCCTTGCAGGAACAAGGTGCCACCT ACGACGCTATCAAGGGTGCCTTTCCGACCGTACGGGGTAGCCAACGCGTCACCAGCGAAGACCCCGAAGGGCAGTTCCAG GCATTGGAGAAGTACTCCACCGACCTCACCAAGCGTGCCCGCGAAGGCAAGATCGATCCCGTCATTGGTAGGGATGAGGA AATCCGCCGCGTGGTACAGGTGCTGAGCCGTCGTACCAAAAACAATCCGGTGCTTATTGGTGAGCCCGGTGTGGGTAAGA CAGCGATTGTCGAAGGCCTTGCGCGCCGCATTGTTGCGGGTGACGTCCCTGAGTCCCTCAAAGGCAAGACGCTGATTAGC CTTGACCTGGGTTCGATGGTCGCCGGCGCGAAATACCGCGGTGAGTTTGAGGAACGCCTTAAGGCCGTGCTCGACGAAAT CAAGAATGCCGACGGGCGGATCATCACCTTCATCGACGAGATCCACACCATCGTCGGTGCCGGCGCGACCGGTGACTCCG CAATGGACGCTGGCAACATGATCAAGCCCCTGCTCGCCCGCGGTGAACTGCGTTTGGTCGGAGCCACAACTCTGGAGGAG TACAGGAAGTACATCGAGAAGGACGCCGCGTTGGAGCGCCGTTTCCAGCAGGTTTACGTGGGCGAACCCAGTGTTGAAGA CGCCGTGGGTATCTTGCGTGGCCTGAAGGAACGCTACGAGGTGCACCATGGTGTGCGCATCCAGGACTCCGCGCTGGTTG CTGCGGCTACTTTGTCCGACCGCTACATCACCTCCCGCTTCCTGCCGGATAAGGCCATCGACCTCGTGGATGAGGCTGCC AGTCGACTGCGCATGGAGATTGATTCCTCCCCGGAGGAGATCGACGCTTTGGAGCGCACGGTTCGCCGCTTGGAGATTGA GGAAATGGCTCTGGCGAAGGAAACGGACGCCGCGTCGGTCGAGCGCCTGGCTAAGCTGCGCCAAGAACTCGCGGATGAAC GCGAGACTTTGAGCGAGTTGACTGCCCGCTGGTCCAACGAGAAAACCGCCATTGACAAGGTGCGTGAGGCCAAAGAACAA CTGGAATCGCTGCGTCAAGAGTCCGAGATTGCCGAGCGTGAAGGTGACTTTGGCAAGGTTGCAGAGCTGCGCTACGGCCG CATCCCCGAGTTGGAGAAGCAAGTCGAGGAGGCTGAAGCGGAGGTGGCGGAATCCGGCAACAATTCCATGCTGTCGGAGG AAGTCACCCCGGACACTATCGCCGAGGTGGTCAGCGCCTGGACTGGTATTCCCGCCGGCAAGATGATGCAGGGTGAGACC GAAAAACTGCTGGAGATGGAGTCCTTCCTCGCCAAGCGCGTGGTCGGCCAGGACGAAGCCGTCGTGGCAGTGTCGGACGC TGTGCGCCGTGCCCGCGCGGGCGTCTCCGATCCTGATCGCCCCACCGGTAGCTTCCTGTTCCTCGGCCCCACGGGTGTGG GTAAGACGGAGCTTGCGAAGTCCTTGGCGGAATTCCTCTTTGACGACGAGCGCGCCATGGTCCGCATCGACATGAGCGAG TACGGCGAGAAGCATGCTGTTGCCCGCCTGGTTGGTGCTCCTCCCGGATACGTTGGTTACGACCAGGGTGGACAGTTGAC GGAGGCTGTACGCCGCCGCCCCTACACCGTGGTGCTGTTCGACGAGGTGGAAAAGGCCCACCCGGATGTCTTCGACATTC TGTTGCAGGTGTTGGACGAAGGTCGCTTGACCGATGGCCAGGGCCGCACGGTGGACTTCCGCAACACCATCTTGATCCTC ACCTCCAACCTGGGTGCCGGCGGTACTAGGGAGCAGATGATGGACGCGGTGAAGGCAGCGTTCAAACCGGAGTTTGTGAA CCGCTTGGATGATGTGGTGATCTTTGATCCTCTAAGCAAGGAGCAGCTGACCAGCATCGTTGACATCCAGATTGGGTCTC TGCAGAAGCGTTTGGTTGCCCGCAGGTTGACGCTGATTGTTGATGACGCCGCGAAAGTCTGGTTGGCGGAGCGCGGTTAC GACCCTGCGTATGGCGCCCGCCCGTTGCGCCGTTTGGTGCAGCAGGCCATTGGTGACCAGTTGGCTAAGAAGTTGTTGGC TGGCGATGTGCGTGATGGTGACGCCGTGGTCGTTGGTGTTGCCGATGACGGTGAGTCCCTGAAGGTGGGTGTTTAG Protein sequence : MDTFTPTTKTNEALQAALQQASALGNPDIRPAHILVALLKQQDSIAYPVLKAAGVEADAVLAKAQALVDSYPKAQGSGIA KPNFNRDCLNAFTAAQELAGELGDEFVSTEVLLAGITRGESDAAKALQEQGATYDAIKGAFPTVRGSQRVTSEDPEGQFQ ALEKYSTDLTKRAREGKIDPVIGRDEEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVAGDVPESLKGKTLIS LDLGSMVAGAKYRGEFEERLKAVLDEIKNADGRIITFIDEIHTIVGAGATGDSAMDAGNMIKPLLARGELRLVGATTLEE YRKYIEKDAALERRFQQVYVGEPSVEDAVGILRGLKERYEVHHGVRIQDSALVAAATLSDRYITSRFLPDKAIDLVDEAA SRLRMEIDSSPEEIDALERTVRRLEIEEMALAKETDAASVERLAKLRQELADERETLSELTARWSNEKTAIDKVREAKEQ LESLRQESEIAEREGDFGKVAELRYGRIPELEKQVEEAEAEVAESGNNSMLSEEVTPDTIAEVVSAWTGIPAGKMMQGET EKLLEMESFLAKRVVGQDEAVVAVSDAVRRARAGVSDPDRPTGSFLFLGPTGVGKTELAKSLAEFLFDDERAMVRIDMSE YGEKHAVARLVGAPPGYVGYDQGGQLTEAVRRRPYTVVLFDEVEKAHPDVFDILLQVLDEGRLTDGQGRTVDFRNTILIL TSNLGAGGTREQMMDAVKAAFKPEFVNRLDDVVIFDPLSKEQLTSIVDIQIGSLQKRLVARRLTLIVDDAAKVWLAERGY DPAYGARPLRRLVQQAIGDQLAKKLLAGDVRDGDAVVVGVADDGESLKVGV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 7e-98 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CARG_08955 | YP_008479530.1 | protein disaggregation chaperone | VFG2076 | Protein | 8e-115 | 41 |
