Gene Information

Name : HMPREF0946_00158 (HMPREF0946_00158)
Accession : YP_008476436.1
Strain : Fusobacterium sp. 3_1_36A2
Genome accession: NC_022196
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 884542 - 885225 bp
Length : 684 bp
Strand : +
Note : -

DNA sequence : 
ATGAATGCTATTGAAATTAAAAATTTAACAGTTGCTTATGGAGAAAATATAGCATTAGAAGATTTTAATTTAGATGTAGA
GATAGGAAGTTTAATGGCACTTGTTGGTCCAAATGGAGCAGGAAAATCAACTCTTATCAAAACAATATTAAAATTTTTAA
AACAGATTACTGGTGAAATAAAAATAAATGGAAAAAATTTAGCCTATGTTCCACAAAGAAATAGTGTTGACTGGGATTTT
CCTACAACACTATTTGATGTAGTTGAAATGGGCTGTTATGGCAGAGTTGGACTTTTTAAGAGAGTTAATAAAGAAGAAAA
AGCGAAGGTTTTAAAAGCAATAGAACAAGTTGGAATGTTAGAATTTAAAGATAGACAAATATCAGAACTTTCTGGAGGGC
AACAACAGAGAGCTTTTATTGCAAGAGCCTTGGTGCAAGAAGCCGATATTTATCTTATGGATGAACCTTTTCAAGGTGTT
GATTCAACAACGGAAAAATCAATAGTTGATATATTAAAAAAATTAAAATCAGATGGTAAGACTTTACTTGTGGTACATCA
TGATTTACAAACTGTTCCAACTTATTTTGAATCTGTTACCTTTATAAATAAAACTGTTATTGCTAGTGGAAAAGTAAAGG
AAGCTTTTACACAAGAAAATATAGAGATGACATATAGGAAATAA

Protein sequence : 
MNAIEIKNLTVAYGENIALEDFNLDVEIGSLMALVGPNGAGKSTLIKTILKFLKQITGEIKINGKNLAYVPQRNSVDWDF
PTTLFDVVEMGCYGRVGLFKRVNKEEKAKVLKAIEQVGMLEFKDRQISELSGGQQQRAFIARALVQEADIYLMDEPFQGV
DSTTEKSIVDILKKLKSDGKTLLVVHHDLQTVPTYFESVTFINKTVIASGKVKEAFTQENIEMTYRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 3e-44 43
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 2e-44 43
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 8e-42 43
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 4e-42 43
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 3e-42 43
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 2e-42 42
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 2e-42 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF0946_00158 YP_008476436.1 hypothetical protein BAC0400 Protein 6e-59 57
HMPREF0946_00158 YP_008476436.1 hypothetical protein BAC0440 Protein 1e-44 44
HMPREF0946_00158 YP_008476436.1 hypothetical protein BAC0350 Protein 2e-42 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF0946_00158 YP_008476436.1 hypothetical protein VFG0526 Protein 1e-42 43