Gene Information

Name : HMPREF0946_00010 (HMPREF0946_00010)
Accession : YP_008476287.1
Strain : Fusobacterium sp. 3_1_36A2
Genome accession: NC_022196
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 719000 - 720475 bp
Length : 1476 bp
Strand : +
Note : -

DNA sequence : 
ATGGAGAATATATTAAAGAAATCATACAAGATGTTTATAAATGGAGAATGGGTAAATTCAAGTAATGGAATTATGGTAAA
GACTTATGCTCCTTATAATAATGAATTATTATCAGAATTTCCTGATGCAAGTGAAAGTGATGTTGATTTAGCTGTTAAAA
GTGCAAAGGAAGCTTTTAAAACTTGGAGAAAAACAACAGTAAAAGAAAGAGCAAAAATTTTAAATAAAATTGCTGATATT
ATAGATAAAAATAAGGATTTATTAGCAACAGTTGAAACTATGGATAATGGTAAACCAATTAGAGAAACAAAATTAGTAGA
TATTCCATTGGCAGCAACACATTTTAGATATTTTGCTGGTTGTATCTTAGCAGATGAAGGACAAGCAACTGTCTTAGATG
AAAAGTTTTTAAGTATAATTTTAAAAGAACCTATTGGTGTTGTAGGACAAATTATTCCTTGGAATTTTCCATTTTTAATG
GCAGCTTGGAAATTAGCACCAGCTCTTGCAGCAGGAGATACAGTTGTTTTAAAACCATCTAGTACAACAACATTAAGTCT
ATTAGTTTTAATGGAACTTATCCAAGATATAATTCCAAAAGGAGTTGTAAATTTAATTACAGGAAAGGGAAGTACAGCAG
GAGAATTTTTAAAGAATCACCCTGATTTAGATAAATTAGCTTTCACAGGTTCAACAGCAGTTGGTAGAGATATAGCTCTT
GCAGCAGCAGAAAAATTAGTTCCTGCTACTCTTGAATTAGGAGGAAAATCAGCAAATATTATTTTAGATGATGCTGATAT
GGAAAAGGCACTTGAAGGAGCTCAACTTGGAATATTATTTAATCAAGGACAAGTTTGCTGTGCAGGTTCAAGAATATTTG
TACAAGAAGGAATATATAATGAATTTATAGGAAAACTTGTTAAGAAATTTGAAAATATTAAAATTGGAAATCCATTAGAT
CCTACAACTGTAATGGGAAGTCAAATAGATGCAAGGCAAGTTAAAACTATTTTAGATTATGTTGAAATAGCTAAACAAGA
AGGTGGAGTTATTTTAACAGGAGGAGTAAAATACACTGAAAATGGTTGTGATAAAGGAAACTTTGTAAGACCTACTTTAA
TAACTAATGTTAATAATGGTTGCCGTGTTTCACAGGAAGAAATTTTTGGACCAGTAGCAGTTGTAATTAAATTTAAAACA
GATGATGAAGTTATAGCCCAAGCAAATGATAGTGAATATGGACTTGGAGGAGCAGTATTTACAAAAAATATTAATAGAGC
TTTAAGACTTGCAAGAGAAATTCAAACAGGTAGAGTATGGATAAATACTTATAACCAAATCCCAGAACATGCTCCATTTG
GAGGATATAAGAAATCTGGTATAGGAAGAGAAACTCATAAAGTTATCTTAGAACATTATACACAAATGAAAAATATTTTA
ATTGATTTAGAAGAAGGAACTTCTGGATTATATTAA

Protein sequence : 
MENILKKSYKMFINGEWVNSSNGIMVKTYAPYNNELLSEFPDASESDVDLAVKSAKEAFKTWRKTTVKERAKILNKIADI
IDKNKDLLATVETMDNGKPIRETKLVDIPLAATHFRYFAGCILADEGQATVLDEKFLSIILKEPIGVVGQIIPWNFPFLM
AAWKLAPALAAGDTVVLKPSSTTTLSLLVLMELIQDIIPKGVVNLITGKGSTAGEFLKNHPDLDKLAFTGSTAVGRDIAL
AAAEKLVPATLELGGKSANIILDDADMEKALEGAQLGILFNQGQVCCAGSRIFVQEGIYNEFIGKLVKKFENIKIGNPLD
PTTVMGSQIDARQVKTILDYVEIAKQEGGVILTGGVKYTENGCDKGNFVRPTLITNVNNGCRVSQEEIFGPVAVVIKFKT
DDEVIAQANDSEYGLGGAVFTKNINRALRLAREIQTGRVWINTYNQIPEHAPFGGYKKSGIGRETHKVILEHYTQMKNIL
IDLEEGTSGLY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-91 52
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 6e-96 50
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 6e-96 50
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 6e-96 50
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-95 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF0946_00010 YP_008476287.1 hypothetical protein VFG0082 Protein 5e-92 52