Gene Information

Name : HMPREF0946_01423 (HMPREF0946_01423)
Accession : YP_008476176.1
Strain : Fusobacterium sp. 3_1_36A2
Genome accession: NC_022196
Putative virulence/resistance : Resistance
Product : methionine gamma-lyase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 586041 - 587228 bp
Length : 1188 bp
Strand : -
Note : -

DNA sequence :
ATGAAAATGAAAAAATGTGGTTTAGGAACAACTGCTATACATGCAGGAACTTTAAAAAATTTATATGGAACACTTGCAAT
GCCTATATATCAAACTTCTACTTTTATATTTGACTCAGCTGAACAAGGTGGAAGAAGATTTGCTCTTGAAGAAGCTGGAT
ATATTTATACAAGACTAGGAAATCCTACAACAACTGTATTAGAAAATAAAATTGCTGTTCTTGAAGAAGGGGAAGCTGGA
GTGGCTATGTCATCTGGTATGGGAGCTATATCTTCAACATTGTGGACTGTCTTAAAAGCTGGTGATCATATTGTTACAGA
TAAAACTTTATATGGTTGTACTTTTGCTTTGATGAATCATGGACTTACAAGATTTGGAGTTGAAGTTACTTTTGTTGATA
CTTCTAATTTAGATGAAGTTAAAAATGCTATGAAAAAAAATACAAGAGTTGTTTATCTTGAAACTCCTGCCAATCCAAAT
TTAAAAATAGTTGATTTAGAAGCTTTATCTAAAATTGCTCACACAAATCCAAATACTTTGGTTATTGTAGATAACACTTT
TGCAACTCCATATATGCAAAAACCTTTAAAATTAGGTGCAGATATTGTTGTTCACTCTGTGACAAAATATATAAATGGAC
ATGGAGATGTTATAGCAGGACTTGTTGTAACAAATAAAGAACTTGCAGATCAAATTCGTTTTGTAGGTTTAAAAGATATG
ACAGGAGCTGTTTTAGGACCACAAGATGCTTATTATATTATTAGAGGTATGAAAACTTTTGAAATTCGTATGGAAAGACA
CTGTGCAAATGCTAAAAAAGTTGTAGAATTTTTAAATAAGCATCCAAAAATTGAAAAAGTTTACTATCCTGGACTTGAAA
CACATCCTGGTTATGAAATAGCTAAGAAACAAATGAAAGATTTTGGAGCAATGATTTCATTTGAATTAAAAGGTGGCTTT
GAAGCAGGTAAAACTCTATTAAATAATTTAAAACTTTGTTCATTAGCAGTTTCATTAGGAGATACTGAAACTCTTATTCA
ACATCCAGCATCTATGACACACTCACCTTATACAAAAGAAGAAAGAGAAGCTGCTGGAATAACTGATGGTTTAGTTAGAT
TATCAGTTGGGCTTGAAAATGTTGAAGATATTATAGCTGATTTGGAACAAGGATTAGAAAAAATTTAA

Protein sequence :
MKMKKCGLGTTAIHAGTLKNLYGTLAMPIYQTSTFIFDSAEQGGRRFALEEAGYIYTRLGNPTTTVLENKIAVLEEGEAG
VAMSSGMGAISSTLWTVLKAGDHIVTDKTLYGCTFALMNHGLTRFGVEVTFVDTSNLDEVKNAMKKNTRVVYLETPANPN
LKIVDLEALSKIAHTNPNTLVIVDNTFATPYMQKPLKLGADIVVHSVTKYINGHGDVIAGLVVTNKELADQIRFVGLKDM
TGAVLGPQDAYYIIRGMKTFEIRMERHCANAKKVVEFLNKHPKIEKVYYPGLETHPGYEIAKKQMKDFGAMISFELKGGF
EAGKTLLNNLKLCSLAVSLGDTETLIQHPASMTHSPYTKEEREAAGITDGLVRLSVGLENVEDIIADLEQGLEKI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 6e-65 45
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-69 42
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 9e-71 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF0946_01423 YP_008476176.1 methionine gamma-lyase BAC0207 Protein 1e-106 55