Gene Information

Name : HMPREF0946_01835 (HMPREF0946_01835)
Accession : YP_008475678.1
Strain : Fusobacterium sp. 3_1_36A2
Genome accession: NC_022196
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 32411 - 33655 bp
Length : 1245 bp
Strand : +
Note : -

DNA sequence : 
ATGGAAAATAGTTCTGAAAAAATAGAAAAATATTTTAAGAAAACTATCAATAGTACTATGAACAATAATAAAAATTTATA
TATTGAAGATATAGAGGAACTATTTATCCGTGAAAATGTTAGTTCTAATAAAGGAATTTTCTCAATATTGTTAGAAGCTA
TAAAATTTTCAGCAAGTGATATTCATATTGAAGCATTGACAGATAAAATAAGAATAAGATATAGAATAAATGGCATTTTA
AAAGAAGTTGCAGAAATTGATAAATCTTTTTTATCTTCAATAGTTTCTAAATTAAAAATTTTATCTTCCCTTGATATAGT
TGAAAAAAGAAAGCCCCAAGATGGTAGATTTTCATTGAAATATAAGGGAAGAGAAATTGATTTTAGAACTTCTATTATGC
CAACTATGAATGGAGAGAAAATAGTAATTAGAATTTTAGATAAATTCAACTATAATTTTACCTTAGAAGATTTATATTTA
TCAGAACAAAATAAAAGAATTTTCTATAAGGCTATAAATCAAAATAATGGGATTATCTTGGTGAATGGACCAACAGGTTC
AGGAAAATCAAGTACACTATATAGTATTTTGAAATATAAAAATAGAGAAGAAGTTAATATTTCAACTGTTGAAGATCCTA
TTGAATATCAAATTGAAGGGATAAATCAAGTACAATGTAGAAATGAAATAGGTTTAGGTTTTGCAACAATTTTAAGAGCA
TTGTTAAGACAAGACCCAGATATTCTAATGGTAGGAGAAATAAGGGATAAGGAAACAGCAGAGATTGTAGTTAAAGCTTC
ACTTACAGGACATTTAGTTTTTTCAACTCTACACTCAAATGATAGTTTGGGCTGTATAAATAGGTTAGTAAATTTAGGAA
TTGACAGTTATTTATTGAGTTTAGTTTTGCAAATGGTAGTTTCTCAGAGGTTAGTTAGAAAACTTTGCTCTCATTGTAAA
AAAGAAGATGAAAATTATAAAGAAAAGTTAAAAAGTTTAAATCTTTCAGAAGAAAAATATAAAAATATAAAATTTTATAC
TTCAGCGGGTTGTGATAAATGTATGGGAACTGGCTATATAGGTAGAATACCTGTTTTTGAAATAATATATTTTGATGATA
TTTTAAAAGATATGTTAGCACAGAAAAAGGAGATAAAACAAAATTTTAAAACTTTACTTGATGATGCAATGGACAAGGTA
AAAGAAGGCTTAACTTCCTTAGATGAGATAATGAGGCAACTATGA

Protein sequence : 
MENSSEKIEKYFKKTINSTMNNNKNLYIEDIEELFIRENVSSNKGIFSILLEAIKFSASDIHIEALTDKIRIRYRINGIL
KEVAEIDKSFLSSIVSKLKILSSLDIVEKRKPQDGRFSLKYKGREIDFRTSIMPTMNGEKIVIRILDKFNYNFTLEDLYL
SEQNKRIFYKAINQNNGIILVNGPTGSGKSSTLYSILKYKNREEVNISTVEDPIEYQIEGINQVQCRNEIGLGFATILRA
LLRQDPDILMVGEIRDKETAEIVVKASLTGHLVFSTLHSNDSLGCINRLVNLGIDSYLLSLVLQMVVSQRLVRKLCSHCK
KEDENYKEKLKSLNLSEEKYKNIKFYTSAGCDKCMGTGYIGRIPVFEIIYFDDILKDMLAQKKEIKQNFKTLLDDAMDKV
KEGLTSLDEIMRQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 8e-64 45
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 6e-64 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF0946_01835 YP_008475678.1 hypothetical protein VFG1876 Protein 3e-63 45
HMPREF0946_01835 YP_008475678.1 hypothetical protein VFG2048 Protein 2e-65 44
HMPREF0946_01835 YP_008475678.1 hypothetical protein VFG0182 Protein 3e-67 43