Gene Information

Name : HMPREF0946_01291 (HMPREF0946_01291)
Accession : YP_008477589.1
Strain : Fusobacterium sp. 3_1_36A2
Genome accession: NC_022196
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2039880 - 2040485 bp
Length : 606 bp
Strand : -
Note : -

DNA sequence :
ATGTATAAATTATTTTTCAAAAGAGTAATTGATATATTTTTTAGTCTTATTTTTATACTTTTATTTTGGTGGTTATACAT
TGTTGTAGCAATTCTAGTAAAAAAAAAATTAGGGAGTCCAGTTTTATTTAAACAAAAAAGACCTGGATTAAATGAAAAAA
TTTTTATTATGTATAAATTTAGAACAATGATAGATAAAAAAGATGAAAAGGGAGATTTATTACCTGATAAAGATAGATTA
ACCAAGTTTGGAAAATTTTTACGTTCAACTAGTTTAGATGAAATACCTGAATTATGGAATGTATTAAAAGGTGAAATGTC
TTTAGTTGGACCAAGACCATTATTAGTGCAGTATTTATCAAAATATACAAAAGAAGAAAAGAGAAGGCATGAGGTTAAAC
CTGGAATAACTGGTTGGGCTCAAATAAATGGCAGGAATAACACAACTTGGAGTGACAGATTCAAAAATGATGTTTATTAT
GTTGAAAATTTTTCTTTTTTACTAGATATGAAAATAATTATTCAAACATTTTTAAAAGTAATAAAAAGAAGAGATATTAA
TCAAAATGAAGATGTAACTATGAGAAATTTTCTTGATGAAAAATAA

Protein sequence :
MYKLFFKRVIDIFFSLIFILLFWWLYIVVAILVKKKLGSPVLFKQKRPGLNEKIFIMYKFRTMIDKKDEKGDLLPDKDRL
TKFGKFLRSTSLDEIPELWNVLKGEMSLVGPRPLLVQYLSKYTKEEKRRHEVKPGITGWAQINGRNNTTWSDRFKNDVYY
VENFSFLLDMKIIIQTFLKVIKRRDINQNEDVTMRNFLDEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 2e-25 47
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 6e-27 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF0946_01291 YP_008477589.1 hypothetical protein VFG1309 Protein 3e-27 43