Gene Information

Name : HMPREF0946_01194 (HMPREF0946_01194)
Accession : YP_008477493.1
Strain : Fusobacterium sp. 3_1_36A2
Genome accession: NC_022196
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1941021 - 1942130 bp
Length : 1110 bp
Strand : +
Note : -

DNA sequence :
ATGGACGAAGTTTTAGATGAAAAATATATGGCAAGGGCTATTGAACTAGCTAAAAGAGGAATAGGAGGTGTAAATCCTAA
TCCCCTTGTTGGAGCAGTTATAGTTAAAGATGGTAAAATTATTGGAGAAGGTTGGCATAAAAAATTTGGTGGACCTCATG
CAGAAGTTTGGGCTTTAAATGAAGCAGGAGAAAATGCAGAAGGAGCTACTATCTATGTAACCTTAGAGCCTTGTTCTCAT
CAAGGTAAAACTCCTCCCTGTGCTAAAAGAATTGTTGAGGTAGGTATAAAAAGATGCGTTGTTGCTTGTATTGATCCCAA
TCCTTTGGTTGCAGGTAAAGGTATAAAAATAATGGAAGATGCAGGAATTGAAGTTGAGCTTGGAGTTTTAGAAAAAGAAG
CCAAAGATGTAAATAAAATATTTTTAAAATATATAGAAAATAAAATTCCTTATCTATTTTTAAAATGTGGAATTACCCTT
GATGGAAAAATAGCAACAAGAAGTGGAAAATCTAAGTGGATAACCAATGAAATAGCCAGAGAAAAAGTCCAATTTTTAAG
AACTAAATTTATGGCTATTATGGTAGGAATAAATACTGTCTTAAAAGATAATCCAAGTCTAGATTCAAGACTTGATGAAG
AAAAGTCTGGAATTGAAAAAAGAAATCCCTTTAGAGTTGTTATAGACCCTAACCTTGAAAGTCCAATAGAAGCTAAGTTT
TTAAATTTTAATGATGGAAAGGCAATAATAATTACATCTAATGATAATAAAGGGCTTGAAAAAATTGAAAAATATAAAAA
TCTAGGAACAAGATTTATTTTTCTTGAAGGAAAAATATTCAAGATGGAAGATATTTTAAAAGAATTAGGAAAATTAGAAA
TTGATTCTGTTCTTTTAGAAGGAGGAAGTGGACTTATTTCAACTGCTTTCAAAGAAAATATCATCGATGCAGGAGAAATA
TTTATTGCTCCAAAAATTATTGGAGATAACTCTGCTATTCCTTTTATAAATGGTTTTAACTTTGGTAATATGGAAGAAGT
ATTTAAACTTCCTAATCCTAAATTTAATATCTATGGAGATAACATTTCCATAGAGTTCAAAAACTTATAG

Protein sequence :
MDEVLDEKYMARAIELAKRGIGGVNPNPLVGAVIVKDGKIIGEGWHKKFGGPHAEVWALNEAGENAEGATIYVTLEPCSH
QGKTPPCAKRIVEVGIKRCVVACIDPNPLVAGKGIKIMEDAGIEVELGVLEKEAKDVNKIFLKYIENKIPYLFLKCGITL
DGKIATRSGKSKWITNEIAREKVQFLRTKFMAIMVGINTVLKDNPSLDSRLDEEKSGIEKRNPFRVVIDPNLESPIEAKF
LNFNDGKAIIITSNDNKGLEKIEKYKNLGTRFIFLEGKIFKMEDILKELGKLEIDSVLLEGGSGLISTAFKENIIDAGEI
FIAPKIIGDNSAIPFINGFNFGNMEEVFKLPNPKFNIYGDNISIEFKNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 3e-47 44
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 3e-47 44