Gene Information

Name : HMPREF0946_01145 (HMPREF0946_01145)
Accession : YP_008477444.1
Strain : Fusobacterium sp. 3_1_36A2
Genome accession: NC_022196
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase pdxS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1890839 - 1891681 bp
Length : 843 bp
Strand : +
Note : -

DNA sequence :
ATGGATACAAGATTTAATGGTGGAGTTATTATGGATGTAACAACAAAGGAACAAGCAATTATTGCCGAAGAAGCAGGAGC
TGTTGCTGTTATGGCTTTGGAAAGAATACCTGCTGATATCAGAGCAGCTGGTGGAGTTTCCAGAATGAGTGATCCAAAAT
TGATAAAAGAAATTATGTCAGCAGTAAAAATTCCTGTAATGGCAAAAGTGAGAATAGGTCATTTTGTAGAAGCTGAAATA
TTACAAGCAATAGGAATTGATTTTATTGATGAATCAGAAGTCCTATCACCAGCTGATTCAGTATATCATGTAAATAAAAA
GAATTTTTCTACTCCTTTTGTATGCGGAGCTAGAAATTTAGGTGAAGCGTTAAGAAGAATATGTGAAGGTGCAAAGATGA
TTAGAACAAAAGGAGAAGCTGGAACAGGAGATGTTGTTCAAGCTGTTTCACATATGAGGCAAATTATGAAAGAAATTAAT
CTTGTGAAAGCATTACGCGAAGATGAATTATATGTAATGGCAAAAGACTTGCAAGTTCCTTATGACTTAGTAAAATATGT
TCATGAAAATGGTAGATTACCTGTACCTAACTTTTCAGCAGGTGGAGTTGCTACTCCAGCTGATGCAGCACTTATGAGAA
GATTAGGAGCAGATGGTGTATTTGTAGGAAGTGGAATTTTTAAATCTGGTGATCCTAAAAAAAGAGCTAAGGCTATTGTG
GAAGCTGTTAAAAATTATAATAATCCAGAAATTATTGCCAAAGTTTCAGAAGATTTAGGTGAAGCTATGGTAGGAATTAA
TGAAAATGAAATAAAAATTATTATGGCTGAAAGAGGAGTATAA

Protein sequence :
MDTRFNGGVIMDVTTKEQAIIAEEAGAVAVMALERIPADIRAAGGVSRMSDPKLIKEIMSAVKIPVMAKVRIGHFVEAEI
LQAIGIDFIDESEVLSPADSVYHVNKKNFSTPFVCGARNLGEALRRICEGAKMIRTKGEAGTGDVVQAVSHMRQIMKEIN
LVKALREDELYVMAKDLQVPYDLVKYVHENGRLPVPNFSAGGVATPADAALMRRLGADGVFVGSGIFKSGDPKKRAKAIV
EAVKNYNNPEIIAKVSEDLGEAMVGINENEIKIIMAERGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 3e-79 67
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 3e-79 67
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 4e-79 67