Gene Information

Name : BN865_10040 (BN865_10040)
Accession : YP_008473660.1
Strain : Campylobacter coli 76339
Genome accession: NC_022132
Putative virulence/resistance : Virulence
Product : UDP-N-acetylgalactosaminyltransferase , CAzY family GT4
Function : -
COG functional category : -
COG ID : -
EC number : 2.4.1.-
Position : 952375 - 952977 bp
Length : 603 bp
Strand : +
Note : -

DNA sequence : 
ATGTATGAGAAATGGATAAAAAGAATTTTTGATTTTGTTTTGGCTTTGTTTCTTTTGGTGTTTTTTTCACCTCTTATTTT
AATCACTGCCTTACTTTTAAAAATAACTCAAGGTAGTGTGATTTTCACTCAAAATCGTCCAGGTTTAAATGAAAAAATTT
TTAAAATTTATAAATTTAAAACCATGAGTGATGAAAGAGATGAAAAGGGTGAGCTTTTAAGTGATGAGTTGCGCTTAAAA
GCTTTTGGGAAGATTGTTAGAAGTTTAAGTTTAGATGAGCTTTTGCAGCTTTTTAATGTATTAAAGGGTGATATGAGTTT
TGTAGGGCCAAGACCCCTTTTGGTAGAATACCTACCCCTTTATAATGAAGAGCAAAAACTCCGTCATAAAGTGCGTCCTG
GTATCACAGGATGGGCGCAGGTAAATGGTAGAAATGCGATTTCTTGGCAAAAAAAATTCGAACTTGATGTGTATTATGTA
AAAAATATTTCTTTTTTGTTGGATTTAAAAATCATGTTTTTAACAGCCCTAAAAGTTTTAAAAAGAAGCGGAGTAAGTAA
AGAAGGACATGTTACAACGGAGAAATTTAATGGCAAGAACTGA

Protein sequence : 
MYEKWIKRIFDFVLALFLLVFFSPLILITALLLKITQGSVIFTQNRPGLNEKIFKIYKFKTMSDERDEKGELLSDELRLK
AFGKIVRSLSLDELLQLFNVLKGDMSFVGPRPLLVEYLPLYNEEQKLRHKVRPGITGWAQVNGRNAISWQKKFELDVYYV
KNISFLLDLKIMFLTALKVLKRSGVSKEGHVTTEKFNGKN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 5e-23 43
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 7e-24 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BN865_10040 YP_008473660.1 UDP-N-acetylgalactosaminyltransferase , CAzY family GT4 VFG1309 Protein 1e-23 42
BN865_10040 YP_008473660.1 UDP-N-acetylgalactosaminyltransferase , CAzY family GT4 VFG1369 Protein 4e-21 42