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Name : BN865_07210 (BN865_07210) Accession : YP_008473393.1 Strain : Campylobacter coli 76339 Genome accession: NC_022132 Putative virulence/resistance : Virulence Product : Capsular polysaccharide biosynthesis/export periplasmic protein WcbA; Capsular polysaccharide export system protein KpsC Function : - COG functional category : - COG ID : - EC number : - Position : 676942 - 678969 bp Length : 2028 bp Strand : + Note : - DNA sequence : ATGGAATATCATACCACTTCAAAAAAACTTATAAAAAATCTTAAAGATTTTTACAAGATAACCCTATATAAAACCTATAA AAACATAAATAAAGAAGATGTTTTTGTAGGCTGGGGTAGAAAAAATTCAGGTTTAAAAGCTATGGCTCTAGCTAAAAAAT ATAATGCTAAATTTATGCTTTTCGAAGATGGTTTTTTACGCTCATTAAATTTAGGTGTAGAAAATAGTCCGAGTTTTTCT ATAGTTAAAGATGATGTGGGGATTTATTATGATGCGAGCACTTTTTCAAGGCTTGAAAATATTTTAAATACCTATGAATT TAGCTCTAAAGAACTAGAGCAGACAAAAAAAGCTATAGAGCTTATTAAAAGAGAAAAGCTTAGTAAATACAATAACAATT TTTGCATACCTCAAGAGCTTTTTGGTGTCAATGAAGAACGTGTTTTGATTATTACCCAAGTAGAAAATGACACTTCACTT CGATTTGGTTTAGCGAGTGATTTTTCGACCCAAGATATCATAAATGACGCTCTAGAGGAAAATCCAAAAGCTAAAATTTA TATTAAAATCCATCCTGATGTACTAAGCGGTAAAAAACAAAGTGATTTTAGCATGCAAGATTTACCTAATAGATGTGTGA TTTTAAAAGAAAATTATAATCCCATAGAGTTATTAAGCCATTTTAAAAAAGTCTATACTAAGACTTCAGGCATGGGTTTT GAAGCTTTGATGCAAGGGTGTGAATGTGCGTGTTATGGTATGCCTTTTTATGCAGGATGGGGGCTAACTCAAGATAGGCT AGATTGTAAAAGAAGGGTTAAAAAAAGATCTTTAGAGGAAGTTTTTTATGCTGCTTATATCCTATACAGTGAGTATTTTA ATCCCTACTTAAATCAAAAAAGTGATATTTTTGATACTATTTTTACCCTAGCAAGATACAAAAGGATAGAGCAGGTAAAT TCTCATACTTTGTATTTTTTAGGTTTTACTTTGTGGAAGCGTTGGTTTATGAAGCCATTTTTCAAAGCCAAAAACAATAA AATCATTTTTTTAAACTCACTTAAAGAGCTTTATAACATCAAGCTAAATTCTAAAGATAAAATTTTCATTTGGGGCAAAA AGTATGATAAAGCTTTATTAGCTAAAGATTTTAATAATGAAATTTTTTTAGTCGAAGATGGCTTTTTGCGCTCGGTTTTT TTAGGTTCAGACCTTACGCGCCCTTTTTCTTTGATAGTAGATAGCAAAGGTTTGTATGTAGATCCTAATCATCCTAGTGA TTTAGAAGAACTTTTACAAAATCATGAATTTGATGATAGTTTAAGACAAAGAGCCAAAAAACTCATTACTACCATAACAC AAAATAAATTTTCAAAATACAACGGCCTAAAGCATGAAAAACTTAACTTTAATACCAATAAAAAAATCATCCTTATTCCT GCTCAAGTAGAAGATGATGCTTCGATGATTTTAGGTGGAGCAGGTTTTGATACCTTAAAACTTTTACAAAGTGTAAGAGC TGCAAATAAAGACGCTTTTATCGTTTTTAAATCTCATCCCGATGTTTTAAGTGGAAATCGCAAGGGTTTAAAAGATAAGG GTATTATTTTAAAATACTGCGATGAAATCATAGAAAATGTCAGTATAGACAGTGCGATAAATGCGTGTGATGAAGTACAT ACCATCACTTCTACTAGTGGTTTTGATGCTCTTTTGCGGGGTAAGAAAGTAGTGGTTTATGGAAAGCCTTTTTATGCAGG TTGGGGATTGACTCAGGATTTGCACAGAATTTCAAGACGCACAAGGATGCTCAACTTGGAAGAGCTTGTTGCGGGGGTTT TGATCCTTTATCCAAGATATATTCATCCAAAGAGTAAAAATTTATGTGAAGTTGAGCTTGCTTTAGATATAATGTTAGCT TTGCAAAGGGATTATTTTTCAAAAAGATGGCTAAAAATTTTAATTGATTTTAGAATTTTCATGCTCAGAAAGTTAAGAAG AATATATGAATTTTTTATAAAAAGATGA Protein sequence : MEYHTTSKKLIKNLKDFYKITLYKTYKNINKEDVFVGWGRKNSGLKAMALAKKYNAKFMLFEDGFLRSLNLGVENSPSFS IVKDDVGIYYDASTFSRLENILNTYEFSSKELEQTKKAIELIKREKLSKYNNNFCIPQELFGVNEERVLIITQVENDTSL RFGLASDFSTQDIINDALEENPKAKIYIKIHPDVLSGKKQSDFSMQDLPNRCVILKENYNPIELLSHFKKVYTKTSGMGF EALMQGCECACYGMPFYAGWGLTQDRLDCKRRVKKRSLEEVFYAAYILYSEYFNPYLNQKSDIFDTIFTLARYKRIEQVN SHTLYFLGFTLWKRWFMKPFFKAKNNKIIFLNSLKELYNIKLNSKDKIFIWGKKYDKALLAKDFNNEIFLVEDGFLRSVF LGSDLTRPFSLIVDSKGLYVDPNHPSDLEELLQNHEFDDSLRQRAKKLITTITQNKFSKYNGLKHEKLNFNTNKKIILIP AQVEDDASMILGGAGFDTLKLLQSVRAANKDAFIVFKSHPDVLSGNRKGLKDKGIILKYCDEIIENVSIDSAINACDEVH TITSTSGFDALLRGKKVVVYGKPFYAGWGLTQDLHRISRRTRMLNLEELVAGVLILYPRYIHPKSKNLCEVELALDIMLA LQRDYFSKRWLKILIDFRIFMLRKLRRIYEFFIKR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lipA | NP_273145.1 | capsule polysaccharide modification protein | Not tested | IHT-A | Protein | 2e-108 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BN865_07210 | YP_008473393.1 | Capsular polysaccharide biosynthesis/export periplasmic protein WcbA; Capsular polysaccharide export system protein KpsC | VFG0259 | Protein | 7e-109 | 42 |
| BN865_07210 | YP_008473393.1 | Capsular polysaccharide biosynthesis/export periplasmic protein WcbA; Capsular polysaccharide export system protein KpsC | VFG0692 | Protein | 8e-103 | 41 |
