|
Name : BN865_13620c (BN865_13620c) Accession : YP_008473997.1 Strain : Campylobacter coli 76339 Genome accession: NC_022132 Putative virulence/resistance : Unknown Product : Type I restriction-modification system, restriction subunit R Function : - COG functional category : - COG ID : - EC number : 3.1.21.3 Position : 1296985 - 1299933 bp Length : 2949 bp Strand : - Note : - DNA sequence : ATGACTAACTACCAAGAAAAAGATTTAGAAAATTTCATAGAGTCTTACTTGTTAGAAAACCATGCCTATATCAAAAGAAC AAATGAAAACTTTGATAAAAATTTATGTATCGATACAGAATTTTTTGAGAATTTCTTACAAGCTACACAAAGTGTAGCAC TTGAAGAGCTTAAAAAGCGTTGTGGGCAAAACTATAAAAAAGAACTTTTTGATCGTATTTTCTCACAGATTAAAACCAAA GGCATAGTCAAAGCCTTGCAAGGCTATGTAGAGATCAAAGGCATTAAATTTTATCTAGCCTTTGCCAAGCCAAACACCAA CGCAAACGCACAAAGCCTGCGCAACTACGAGCAAAATACCCTTTCTATCATACGCCAGCTTTACTACAGCACGCAAAATA AAAACTCCATCGATATGGTACTCTTTTTAAATGGCTTACCCCTTATCACCATAGAGCTTAAAAACCATTTCACCGGACAA AATGTCTTTCACGCTATAGAGCAATACAAAAAAGACAGAAACCCAAAAGAAACGCTATTTAACCATACCATAGTGCATTT TGCATTGGATCATGATCTTTGCTATATGAGCACAAGATTGGATCAAAGTGCGACTACATTTTTGCCTTTTAACCTTGGCT TAAACAATGGCAGCGGCAAGATAGGCCTAGCAAATGGAGCAGGCAATCCACCAAGTGATGGTATAAAAACAGCGTATTTG TGGGAGAAAATCTTTAAAAAAGACACCTTGTTAAATTTACTTTTTAATTTCGTGCAAGTTATAAAAAAGGAAAACAAAGA AATCATCATCTTTCCTAGATATCATCAATTCGATGTGGTAGAAAAGCTACTTGCTCATGCAAAAGAAAAGGGCGCAGGAC AACGCTACTTGATCCAACACAGCGCAGGAAGTGGCAAGAGCAACTCTATATCTTGGCTCGCTCATCATCTAGTAAGCTTA CATAAACTAGAAGAAAATAGCTTTAAAAATATCTTTGATTCTATCATCGTAGTAACCGATAGAAAAGTGCTTGATAGTCA AATAAGAGAAAATGTCAAAGCCTTTTCTCACACAAAAAATTTAGTAGAAGTCATCACTCATGGAAGCAAACAGCTAAAAG AGGCCTTAGAAGAGGGTAAGAAAATCATCATCACGACTATCCAAAAATTTCCTTATATTTTAAATGAAGTCAAAAGCTTA AAAAGCAAAACTTTTGCTATCATCATCGATGAAGCCCACTCAAGCCAAAGCGGAAGCAATGCACAAAAAATGGCAGAAGC TATAAGAGATAAAAGCGGTGATGAAAGCCAAAATTTAGAAGATGAAATTCTAGAAATCATAAAAAGCAAAAAGCTCCAGC CTAATGCCTCGTATTTTGCATTTACTGCTACACCTAAGCCTAAAACTTTGGAAATGTTTGGTATGCCTTGTGAGGTTGAT GAAGGGCAAAAATTTATCCCTTTTCATCTTTACTCGATGAAGCAAGCCATAGAAGAAGGCTTTATACTCGATGTATTAAA AGGCTATACGACTTATAAAAGCTACTATAAAATCATATCTTGCACAAATGATAATCCAAAATACGATAAAAAAAGAGCCA ACGCAAAACTAAAAGCTTATGTGCAAAACAATATCAGAACAATCGAGCAAAAATCACAAATCATGTGCGAGCATTTTTTC CAAAACAGCTTTAAAAAGATAAATGGCAAAGCAAAAGCTATGATCGTAACAAGCTCAAGAGAGAATGCTGTGAAGTATTA TCTTGTTTTTAGAGAGTATTTGAGAAAAAATTATCCACATTTTAAGACTATCGTGGCTTTTTCAGGTGAAATCAATTTAG AGGGCGAAATTTATAGCGAAAGTGGCTTGAATGGTTTTTCAGAAGGTGTTTTAAAGGACGAATTTAAAAAAGATGAGTAT CGCTTTTTAATCGTTGCTGAAAAATACCAAACCGGATTTGATGAGCCATTGCTCCATACTATGTATGTCGATAAAACCTT AAGCGGAGTGAGTGCGGTGCAAACCCTATCGAGGCTTAATCGAACTTGTAAAAATAAAGAAGATACCTTTGTGCTAGATT TTGCAAATACTCATGAAGATATAGCCAAGGCTTTTAGTGTGTTTTATGAGCAAACTTATCTAAATGAACCTACTGATGAT AATAGAATTTTTGATCTTAAAGCAAATCTTAGTGAATATGAAATTTATACTCAAGAAGAAATAGATGATTTTACAAATGC TATTTTAGGAAGAGAAAAAGAAAATGTTATACACTCAAAATTAGATATAATGCTTGCTAGATTTGATGAAAAAAGCGATG ATGAAAAACTAGATTTTTATAGTAAGGCAAAAACTTATCTTAAAGAGTATTCTTTTTTGGCTCAAATTTTACCTTATGAA GATGTTGAACTTGAAAAGCTTTATATACTGCTTAAAAAACTTGCAAGTAAGATTATTTTACCTAAATCTCAAGATTTGGC TAAAGGAATTTTAGATAATGTAGATTTTGATAGCTATCGTTTACAGCTTGATAAAACACAAGATATCTTTTTGCAGGGAA ATGGAGAGTTAAAACCCTCTTTTGCAGACGGATCAAGCAAGAGTGTTGAAACTGAGCTAGAAGAGCTTTCAAATATCATC AAAGACTTTAATAACAAATACGCAAATATAGACTTCAATGAAAGCGATAAAATCGCTAAAATTTTATATGATATAAAAGA TGATATGGTAAAAAATGAAAGAATTCTCGAATCTTTAAATAAATCCGATATGCAAAATTCTCGTATTGAATTTAATATGC TGTTGGAAGACAAAATTCAAGATATTTTGAATTTAAATTTGGAGCTTTTTAAGCAATTTAACCAAAATAATGAATTTAAA GATAAGATAGCAAATACGATGTTTAATATGATCTGCGAAGATTTCAAAAAGGAAATAAATAGCTTTTAA Protein sequence : MTNYQEKDLENFIESYLLENHAYIKRTNENFDKNLCIDTEFFENFLQATQSVALEELKKRCGQNYKKELFDRIFSQIKTK GIVKALQGYVEIKGIKFYLAFAKPNTNANAQSLRNYEQNTLSIIRQLYYSTQNKNSIDMVLFLNGLPLITIELKNHFTGQ NVFHAIEQYKKDRNPKETLFNHTIVHFALDHDLCYMSTRLDQSATTFLPFNLGLNNGSGKIGLANGAGNPPSDGIKTAYL WEKIFKKDTLLNLLFNFVQVIKKENKEIIIFPRYHQFDVVEKLLAHAKEKGAGQRYLIQHSAGSGKSNSISWLAHHLVSL HKLEENSFKNIFDSIIVVTDRKVLDSQIRENVKAFSHTKNLVEVITHGSKQLKEALEEGKKIIITTIQKFPYILNEVKSL KSKTFAIIIDEAHSSQSGSNAQKMAEAIRDKSGDESQNLEDEILEIIKSKKLQPNASYFAFTATPKPKTLEMFGMPCEVD EGQKFIPFHLYSMKQAIEEGFILDVLKGYTTYKSYYKIISCTNDNPKYDKKRANAKLKAYVQNNIRTIEQKSQIMCEHFF QNSFKKINGKAKAMIVTSSRENAVKYYLVFREYLRKNYPHFKTIVAFSGEINLEGEIYSESGLNGFSEGVLKDEFKKDEY RFLIVAEKYQTGFDEPLLHTMYVDKTLSGVSAVQTLSRLNRTCKNKEDTFVLDFANTHEDIAKAFSVFYEQTYLNEPTDD NRIFDLKANLSEYEIYTQEEIDDFTNAILGREKENVIHSKLDIMLARFDEKSDDEKLDFYSKAKTYLKEYSFLAQILPYE DVELEKLYILLKKLASKIILPKSQDLAKGILDNVDFDSYRLQLDKTQDIFLQGNGELKPSFADGSSKSVETELEELSNII KDFNNKYANIDFNESDKIAKILYDIKDDMVKNERILESLNKSDMQNSRIEFNMLLEDKIQDILNLNLELFKQFNQNNEFK DKIANTMFNMICEDFKKEINSF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAS0025 | YP_042158.1 | type I restriction enzyme protein | Not tested | SCC476 | Protein | 9e-144 | 43 |
| VPI2_0013c | ACA01830.1 | type I restriction enzyme HsdR | Not tested | VPI-2 | Protein | 1e-154 | 41 |
