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Name : HPSA20_0872 (HPSA20_0872) Accession : YP_008471831.1 Strain : Helicobacter pylori SouthAfrica20 Genome accession: NC_022130 Putative virulence/resistance : Unknown Product : ACT domain protein Function : - COG functional category : - COG ID : - EC number : - Position : 811782 - 813047 bp Length : 1266 bp Strand : + Note : - DNA sequence : ATGAAAAAAAGATTGAATATAGGGCTTGTGGGTTTAGGGTGTGTGGGGAGCGCGGTCGCTAAAATCTTACAAGAAAATCA AGAGATTATAAAAGACAGGGCCGGTGTGGAAATTGCCATTAAAAAAGCGGTGGTGCGAGACATTCAAAAACACAAGGGCT ATGCTTTTGAAGTTAGTAATGATTTAGAAAGCTTGATAGAAGATGAAGAGATTGATATTGTCGTGGAGCTTATGGGTGGG GTTGAAGCGCCTTATCTTTTAGCTAAAAAAACTTTAGCCAAACAAAAAGCTTTCGTTACAGCCAATAAAGCCATGTTGGC GTATCACCGCTATGAATTAGAGCAAATCGCCAAAAACACCCCCATAGGCTTTGAAGCGAGCGTGTGCGGAGGGATCCCTA TTATCAAGGCTTTAAAAGACGGCTTGAGCGCTAATCATATCCTTTCTTTTAAAGGGATTTTAAACGGCACAAGCAATTAC ATTTTAAGCCAGATGTTTAAAAATCAAGCGAGTTTTAAGGACGCTTTAAAAGACGCGCAACATTTAGGCTATGCGGAATT GAACCCTGAATTTGACATTAAAGGCATTGATGCAGCGCACAAATTATTAATTTTAGCGTCTTTAGCGTATGGCATTGATG CGAAATTAGAAGAAATTCTCATTGAAGGCATTGAAAAAATAGAGCCAGATGACATGGAGTTTGCAAAAGAGTTTGGTTAT AGTATTAAACTTTTAGGCATCGCTAAAAAACACCAAGATTGCATTGAATTAAGGGTGCATCCAAGCATGATTAAAAACGA ATCCATGCTTTCTAAAGTGGATGGGGTGATGAATGCAATCAGCGTTATAGGGGATAAGGTGGGCGAGACTTTGTATTATG GGGCTGGGGCTGGGGGAGAGCCTACCGCAAGCGCGGTCATTAGCGATATTATAGAAATTGCAAGGAAAAAAAGCTCTTTA ATGCTAGGCTTTGAAACCCCCCAAAAACTCCCCCTAAAACCCAAAAAAGAAATCCAATGCGCTTATTATGCGCGTTTGTT GGTGAGCGATGAAAAAGGGGTTTTTTCTCAAATCAGCGCGATTTTAGCCAAAAACGATATTTCGCTCAACAATGTCTTGC AAAAAGAAATTTTGCATTCTAACAAGGCTAAAATTTTATTTTCCACGCACACCACGAGCGAAAAGTCTATGCTGAACGCC CTGAAAGAGCTTGAAAATTTAAAAAGCGTGTTGGATACCCCTAAAATGATCCGCTTGGAAAATTGA Protein sequence : MKKRLNIGLVGLGCVGSAVAKILQENQEIIKDRAGVEIAIKKAVVRDIQKHKGYAFEVSNDLESLIEDEEIDIVVELMGG VEAPYLLAKKTLAKQKAFVTANKAMLAYHRYELEQIAKNTPIGFEASVCGGIPIIKALKDGLSANHILSFKGILNGTSNY ILSQMFKNQASFKDALKDAQHLGYAELNPEFDIKGIDAAHKLLILASLAYGIDAKLEEILIEGIEKIEPDDMEFAKEFGY SIKLLGIAKKHQDCIELRVHPSMIKNESMLSKVDGVMNAISVIGDKVGETLYYGAGAGGEPTASAVISDIIEIARKKSSL MLGFETPQKLPLKPKKEIQCAYYARLLVSDEKGVFSQISAILAKNDISLNNVLQKEILHSNKAKILFSTHTTSEKSMLNA LKELENLKSVLDTPKMIRLEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00305 | YP_008207770.1 | Homoserine dehydrogenase | Not tested | AbaR25 | Protein | 1e-62 | 41 |
| BJAB0868_00309 | YP_008211635.1 | Homoserine dehydrogenase | Not tested | AbaR26 | Protein | 1e-62 | 41 |
