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Name : HPSA20_0559 (HPSA20_0559) Accession : YP_008471520.1 Strain : Helicobacter pylori SouthAfrica20 Genome accession: NC_022130 Putative virulence/resistance : Unknown Product : sel1 repeat family protein Function : - COG functional category : - COG ID : - EC number : - Position : 518368 - 519192 bp Length : 825 bp Strand : - Note : - DNA sequence : ATGTTTAAAGATTGTTATTGCGCTATTTTCTCTCGTTTAAAACCTTTATTGCTTTCATTAGGTTTATTGTTGTTGTTTTC GCTTTGTATAGCTGATGAATATATTAGCATAAGTGATGATTGGGATTTATTTACACGACAATATAAGACATATTATTTTG AAAATGGTTTGGATAATTTTAATAAAGGCCAATACAAGCAAGCCTTTAAAGATTTTAAAACGGCAGAAGAATACGGCATT GGGCTTGGCAGTGTTTATTTAGCCAAAATGTATTTGGAGGGAAAGGGCGTGAAAGTGGATTACAAAAAAGCGCAACTCTA TGCACAAAACGCTATCAAAGGGTATGGGAGCGGCATGTTAGGGGGCGTTTTAATTTTAGGATACATGCAAGCGCAAGGCT TGGGGATGAAAAAGGATTTGAAACAAGCGCTCAAAACTTATAAACATGTGGTTCGCATGCTTTCTAATAAAGGCGTAAAT GTTTATAACCATACTGTCTTTGGTTTCGCTATTGCATCGCAATTCATTGATCTTTCAGGTTTGAGCGCAAATCCTAAAAG ATTTGGAAAGCAATTTGAAAGACTTGAGAATCTTAAGTCATCCCTTCAAGGCAACGGTGAGATACATAATATGACTTCTT ACGAAGATATTGCTGAAATTTCAAGCAATATTATTTTACTCAAACAACAAATGGGGGAAATCCTTTATAGAATCGGAATC GCTTATAAAGAAGGGCTTGGCACTAGAAAGAAAAAGGAAAAGGCTAAAAAATTCTTGCAAAAATCCGCAGAGTTTGGTTA TGAAAAAGCCATGGAAGCTTTGTAG Protein sequence : MFKDCYCAIFSRLKPLLLSLGLLLLFSLCIADEYISISDDWDLFTRQYKTYYFENGLDNFNKGQYKQAFKDFKTAEEYGI GLGSVYLAKMYLEGKGVKVDYKKAQLYAQNAIKGYGSGMLGGVLILGYMQAQGLGMKKDLKQALKTYKHVVRMLSNKGVN VYNHTVFGFAIASQFIDLSGLSANPKRFGKQFERLENLKSSLQGNGEIHNMTSYEDIAEISSNIILLKQQMGEILYRIGI AYKEGLGTRKKKEKAKKFLQKSAEFGYEKAMEAL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| HPB8_726 | YP_003728747.1 | chitin synthase regulatory factor 3 | Not tested | cag PAI | Protein | 3e-62 | 73 |
