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Name : glnA (HPSA20_0558) Accession : YP_008471519.1 Strain : Helicobacter pylori SouthAfrica20 Genome accession: NC_022130 Putative virulence/resistance : Virulence Product : glutamine synthetase, type I Function : - COG functional category : - COG ID : - EC number : 6.3.1.2 Position : 516729 - 518174 bp Length : 1446 bp Strand : + Note : - DNA sequence : ATGATAGTAAGAACTCAAAATAGCGAAAGCAAGATCAAAGAATTTTTTGCATTTTGCAAAGAAAATGAAGTGGAATTTGT GGATTTTAGATTCAGCGATATTAAAGGCACTTGGAATCATATCGCTTATTCTTTTGGGGCTTTAACGCATGGCATGTTTA AAGAAGGGATCCCTTTTGATGCAAGCTCTTTTAAAGGCTGGCAAGGCATTGAACACTCGGATATGATTTTAACTCCCGAT TTGGTGCGTTATTTCATTGACCCTTTTAGCGCGGATGTGAGCGTGGTCGTGTTTTGCGATGTGTATGATGTGTATAAAAA CCAGCCTTATGAAAAATGCCCTAGAAGTATCGCTAAAAAAGCCTTAAAACATTTAAGAGATTTGGGCTTAGGCGATGTGG CTTATTTTGGCGCGGAGAATGAATTTTTTATCTTTGATTCCATTAAGATTAAAGACGCTTCCAATTCCCAATACTATGAA GTGGATAGCGAAGAGGGCGAATGGAATAGGGATAGGAGTTTTGAAAATGGCGTCAATTATGGGCATAGACCGGGCAAGCA AGGGGGCTATTTGCCTGTGCCACCAACGGATACGATGATGGATATTCGCACTGAAATTGTGAAAGTCTTAAACCAAGTGG GGCTAGAAACTTTTGTCGTCCATCATGAAGTCGCGCAAGCGCAAGGCGAAGTGGGCGTGAAATTTGGGGATTTAGTGGAA GCGGCTGATAATGTCCAAAAACTCAAATATGTGGTTAAAATGGTCGCTCATTTGAACGGCAAAACCGCCACTTTCATGCC AAAACCTTTGTATGGGGATAATGGGAGTGGGATGCACACCCATGTGAGCGTTTGGAAAAACAATGAAAACCTTTTTAGCG GCGAAACTTACAAGGGCTTGAGCGAATTGGCGTTGCATTTTTTAGGGGGCGTGTTGCACCACGCTAGAGGGTTAGCCGCT TTCACGAACGCTTCTACTAATTCTTATAAACGCCTAATTCCTGGCTATGAAGCCCCATCTATTTTGACTTATTCCGCTAG CAATAGGAGTGCGAGCGTTCGTATCCCTTATGGGATTTCTAAAAATAGCGCTAGGTTTGAATTCAGGTTTCCGGATAGCT CATCAAACCCTTACTTGGCTTTTGGGGCTATTTTAATGGCCGGTATTGATGGCGTTAAAAATAAAATTGATCCAGGCGAA GCGATGGATATTAACCTTTTCAAATTGACTTTAGATGAAATCCGAGAAAAGGGCATCAAACAAATGCCCCACACTTTAAG GCGATCGTTAGAAGCGATGTTAGCCGATAGGCAATATTTAAAAGAAGGGCAAGTCTTTAGCGAAGAATTTATCCAAGCCT ACCAGTCGCTTAAATTCAATACCGAAGTGTTTCCATGGGAAAGCAAACCCCATCCTTTTGAATTTATCACCACTTATTCA TGCTAA Protein sequence : MIVRTQNSESKIKEFFAFCKENEVEFVDFRFSDIKGTWNHIAYSFGALTHGMFKEGIPFDASSFKGWQGIEHSDMILTPD LVRYFIDPFSADVSVVVFCDVYDVYKNQPYEKCPRSIAKKALKHLRDLGLGDVAYFGAENEFFIFDSIKIKDASNSQYYE VDSEEGEWNRDRSFENGVNYGHRPGKQGGYLPVPPTDTMMDIRTEIVKVLNQVGLETFVVHHEVAQAQGEVGVKFGDLVE AADNVQKLKYVVKMVAHLNGKTATFMPKPLYGDNGSGMHTHVSVWKNNENLFSGETYKGLSELALHFLGGVLHHARGLAA FTNASTNSYKRLIPGYEAPSILTYSASNRSASVRIPYGISKNSARFEFRFPDSSSNPYLAFGAILMAGIDGVKNKIDPGE AMDINLFKLTLDEIREKGIKQMPHTLRRSLEAMLADRQYLKEGQVFSEEFIQAYQSLKFNTEVFPWESKPHPFEFITTYS C |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glnA | YP_003728749.1 | glutamine synthetase | Not tested | cag PAI | Protein | 0.0 | 97 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| glnA | YP_008471519.1 | glutamine synthetase, type I | VFG1399 | Protein | 8e-90 | 45 |
