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Name : HPSA20_0557 (HPSA20_0557) Accession : YP_008471518.1 Strain : Helicobacter pylori SouthAfrica20 Genome accession: NC_022130 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 514518 - 516593 bp Length : 2076 bp Strand : - Note : - DNA sequence : ATGTACGCAAAAGACACCACACTATTAGGATTTTTTGAAGAAAATCAAAACAATCAATTTGTCATTCCTATCTATCAGAG ATTGTATAGTTGGGAAAAGAAACAATGCGAACAATTATGGGATGATATTTTAAAAGTTGGTGGGAATGATAAAATGAATG GGCATTTTATCGGTTCTATTTTGTATGTGCGAGATGGTATTACGCACTCTAGCCCATTACTCATCATTGACGGCCAACAA AGGCTCACCACCATCACGCTTTTACTCATCGCTTTAAGGAATCACTCAAGCGATGAAGTTAAAATTTTGGAAAAATTTTC GCGTAAAGAAATAGAGAACCGCTATCTTATCAACAGCAATAGGGATGGCGATAAGAAATTCAGGCTCATCCTATCAGAGT CCGATAAAGACACCTTGCTATTTTTGATTGATGAAAACAAAAGAAAGCCGAGCGAGCCTTCGGTAAAAATAGTGGAAAAT TTTAAATTGTTTGAAAAATGGATCAGTGAAAACACCGACAAGCTAGAAACGATTGTTAAAGGGTTAGAAAAACTCATGAT AGTTTGGATTGCTTTAGAAAAAGGGAAAGATAATCCTCAACTTATTTTTGAGAGCATAAACTCAAAAGGTATCGAACTCA CGCAAACGGATTTGATCAGAAACTATATCGTAATGGAAACAGAGGTTGAAAAAAAAGAAAACTTTTATAAGAAATATTGG ACTATGGAGAAGGATTTTAAACAAAATAAAACATTGTTTGATCGGTTTGTACGGCATTACCTCACAATCAAAACAGGAAA GATTCCCAATGAGAAAAGAGTTTATGAAGCTTTCAAGGATTACCAGCAAAAAGAAGGGATAGAAACAGAGAATTTATTAA AAGATTTGCAAAAATATTGCGGGTATTTTTGCCAGATCGCATTCAAAAAAGAAGAACATAAGGATCTAAACAAGGCTTTA AGTTTGCTCGTAGATTTAGAAATGGATGTGGTGTATCCGCTATTACTAGAGCTTTATAGCGATTATAGAGATGGCGTTTT ATCCAAGCAGGATTTTATCCGTATTATCGCTTTAACAGAGAGTTATCTTTGCAGAAGGGCGGTGTGTGGACTTGGCACAA ATAGTCTCAATAAAATCTTTCCCTCTTTTACAAAAAAGATTGATAAGAAGCAATACCTTAAAAGCGTAGAGAAGCATTTT GGGTCGCTAAAAGGGAATCAAAGATTTCCAAACAATGATGAGTTTAAAGATCTTTTTATCACGAGAGATTTTTATAAGCT TAAAAAAAATAGATACTTTCTTGAAAGGTTAGAAAGTAGTTTTGGCACAAAAGAGCCGGTCGATACCAAAGAATGCACCA TAGAGCATGTCATGCCCCAAAGTCTCACGCCAAAATGGGAAGAGGACTTGGGCGAAAATTTTGAAACAATACATGAGAAA TACCTCCACACAATAGGGAATCTCACTCTAACCGGTTATAACTCTAAGTATGGCAACAATTCTTTCCAAGAAAAAAGAGA TATGGAGAAGGGCTTTAAACAAAGCTCATTACAACTCAATCAAAGTTTAAAAAAATTGGAACCTTTTGGCGAAAAAGAGA TTCTAGACAGGGCTAGTGATTTAGCAAATCTGGCTTTAAAGATTTGGACTTACCCCAAGCTAGATGCAGAAACATTAGAG AAATATAAACCCAAGAAAGACAAGAAAGAAAAAAAGGCTTATGATTTAAGCTCTTATAACTTTGGCCCTGATTCAAGGGA ATTATTTGATACTTTAAGAAAAGAGATTAAAGCCCTTGATGAATTAGAGAAATATAAACCCAAGAAAGACAAGAAAGAAA AAAAGGCTTATGATTTAAGCTCTTATAACTTTGGCCCTGATTCAAGGGAATTATTTGATACTTTAAGAAAAGAGATTAAA GCCCTTGATGAAAGGGTAACTGAAAATTTTATGAAACATTACATAACCTATAAAGCAGACACCATTTTTGCGAGCGTTGT TCCCTTAAAATGCGAATTAAATCTGATTTTAAATATGGAATTTTCTGAGTTGCAAGATGGAAAAAAGAAAAACTAA Protein sequence : MYAKDTTLLGFFEENQNNQFVIPIYQRLYSWEKKQCEQLWDDILKVGGNDKMNGHFIGSILYVRDGITHSSPLLIIDGQQ RLTTITLLLIALRNHSSDEVKILEKFSRKEIENRYLINSNRDGDKKFRLILSESDKDTLLFLIDENKRKPSEPSVKIVEN FKLFEKWISENTDKLETIVKGLEKLMIVWIALEKGKDNPQLIFESINSKGIELTQTDLIRNYIVMETEVEKKENFYKKYW TMEKDFKQNKTLFDRFVRHYLTIKTGKIPNEKRVYEAFKDYQQKEGIETENLLKDLQKYCGYFCQIAFKKEEHKDLNKAL SLLVDLEMDVVYPLLLELYSDYRDGVLSKQDFIRIIALTESYLCRRAVCGLGTNSLNKIFPSFTKKIDKKQYLKSVEKHF GSLKGNQRFPNNDEFKDLFITRDFYKLKKNRYFLERLESSFGTKEPVDTKECTIEHVMPQSLTPKWEEDLGENFETIHEK YLHTIGNLTLTGYNSKYGNNSFQEKRDMEKGFKQSSLQLNQSLKKLEPFGEKEILDRASDLANLALKIWTYPKLDAETLE KYKPKKDKKEKKAYDLSSYNFGPDSRELFDTLRKEIKALDELEKYKPKKDKKEKKAYDLSSYNFGPDSRELFDTLRKEIK ALDERVTENFMKHYITYKADTIFASVVPLKCELNLILNMEFSELQDGKKKN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| HPB8_729 | YP_003728750.1 | hypothetical protein | Not tested | cag PAI | Protein | 0.0 | 74 |
