|
Name : hemC (HPSA20_0264) Accession : YP_008471229.1 Strain : Helicobacter pylori SouthAfrica20 Genome accession: NC_022130 Putative virulence/resistance : Unknown Product : porphobilinogen deaminase Function : - COG functional category : - COG ID : - EC number : 2.5.1.61 Position : 244834 - 245754 bp Length : 921 bp Strand : - Note : - DNA sequence : GTGGGAAAATTGGTGATTGGCTCTAGGGGGAGCGAACTGGCTTTATGGCAAGCGAACTACATTAGAGAACGCCTGAAAAA AGAATGCTTTATAGAAAGCGAGATTCAAATCGTTAAAACCACAGGCGATAAGATTTTAGATGCGCCTTTAAATAAGATTG GCGGTAAGGGGCTATTCACTAAGGAATTAGAAGAATTGCTTTTAAAAGGTGCAATTGATTTGGCGGTGCATTCTTTAAAA GATGTGCCGGTCGTGTTTGAAAAAGGGTTGGATTTAGCTTGCATCACTCAAAGGGCTGATGTGAGAGACACTTTTTTGAG CGCTCAATTCCCTGATTTGATGAGCTTGCCTAAAGGGGCAAAAGTAGGCACGACTTCTTTAAGGCGCTCCATGCAACTCA AATGCAAACGAAAGGATTTAGACACAGAAAGCTTAAGGGGGAATGTCCAAACCCGTTTGAAAAAGCTTGAATGCGGCGAA TTTGACGCTATCATTTTGGCTGAAGCTGGGTTGTCTCGCTTAAACATTCAAGGAGCGAAATACCGCAAAGCTTTTAGCAC AGAAGAAATGATTCCTAGCATGGGTCAAGGGGCTTTAGGGGTAGAAATGCTTAAAAATCATAAGCATTTTAGCACGCTTC AAAAACTCAATGACGAAAAAAGCGCGTTTTGCTGCCATTTAGAAAGAGAATTTATCAAAGGGCTTAATGGGGGGTGTCAA ATCCCTGTGGGCGTGCATGCGAGTTTAATGGGTGAAAAAGTTAAAATCCAAGCCATTTTAGGCCTGCCTAATGGCGAAGA AGTCATTACTAAAGAAAAACAAGGGGATAAAAATAAGGCGTTTGATTTAGTTCAAGAGCTTTTAGAAGCGTTTTTGCAAA GCGGGGCGAGAGAAATTTTAGAAAAGGCGCAATTGTTTTAA Protein sequence : MGKLVIGSRGSELALWQANYIRERLKKECFIESEIQIVKTTGDKILDAPLNKIGGKGLFTKELEELLLKGAIDLAVHSLK DVPVVFEKGLDLACITQRADVRDTFLSAQFPDLMSLPKGAKVGTTSLRRSMQLKCKRKDLDTESLRGNVQTRLKKLECGE FDAIILAEAGLSRLNIQGAKYRKAFSTEEMIPSMGQGALGVEMLKNHKHFSTLQKLNDEKSAFCCHLEREFIKGLNGGCQ IPVGVHASLMGEKVKIQAILGLPNGEEVITKEKQGDKNKAFDLVQELLEAFLQSGAREILEKAQLF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00327 | YP_008207792.1 | Porphobilinogen deaminase | Not tested | AbaR25 | Protein | 2e-44 | 46 |
| BJAB0868_00331 | YP_008211657.1 | Porphobilinogen deaminase | Not tested | AbaR26 | Protein | 2e-44 | 46 |
