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Name : HPSA20_1719 (HPSA20_1719) Accession : YP_008472649.1 Strain : Helicobacter pylori SouthAfrica20 Genome accession: NC_022130 Putative virulence/resistance : Unknown Product : NLPA lipofamily protein Function : - COG functional category : - COG ID : - EC number : - Position : 1601351 - 1602166 bp Length : 816 bp Strand : + Note : - DNA sequence : ATGAATGCATTCAAGCGTATTATTTGCGTAACGGCTATTGTTTTAGGTTTTTTTAATCTCTTAGACGCCAAACACCACAA AGAAAAACAAGAAAACCACAAAATCACTCGTGAGCTTAAAGTGGGTGCTAGCCCTGTGCCGCATGCGCAAATCTTGCAAT CGGTTGTAGAGGATTTGAAACAAAAAGGGATCAATTTAGTGATCGTGTCTTTTACGGATTATGTGTTGCCTAATTTAGCG CTCAATGACGGCTCTTTAGATGCGAATTACTTCCAGCACCGCCCTTATTTGGATCGGTTTAATTTGGACAGGAAAATGCA CCTTGTTGGTTTGGCCAATATCCATGTGGAGCCTTTAAGATTTTATTCTCAAAAAATCACGGACATTAAAAACCTTAAAA AAGGCTCAGTGATTGCTGTGCCAAATGATCCGGCCAATCAAGGCAGAGCGTTGATTTTATTGCACAAACAAGGGCTTATC GCTCTCAAAGACCCAAGCAATTTATACGCTACGGAGTTTGATATTGTCAAAAATCCTTACAACATTAAAATCAAGCCTTT AGAAGCCGCGTTATTGCCTAAAGTTTTAGGGGATGTGGATGGGGCTATTATCACAGGGAATTACGCTTTGCAAGCAAAAC TCACCGGGGCTTTATTTTCTGAAGATAAGGATTCGCCTTATGCCAATCTTGTAGCCTCTCGTGAGGATAATGTGCAAGAT GAGGCCATAAAGGCGCTGATTGAAGCCTTACAAAGTGAAAAGACCAGGAAATTTATTTTAGACACCTATAAGGGGGCGAT TATCCCAGCCTTTTAA Protein sequence : MNAFKRIICVTAIVLGFFNLLDAKHHKEKQENHKITRELKVGASPVPHAQILQSVVEDLKQKGINLVIVSFTDYVLPNLA LNDGSLDANYFQHRPYLDRFNLDRKMHLVGLANIHVEPLRFYSQKITDIKNLKKGSVIAVPNDPANQGRALILLHKQGLI ALKDPSNLYATEFDIVKNPYNIKIKPLEAALLPKVLGDVDGAIITGNYALQAKLTGALFSEDKDSPYANLVASREDNVQD EAIKALIEALQSEKTRKFILDTYKGAIIPAF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAAV_0786 | YP_003281709.1 | ABC transporter substrate-binding protein | Not tested | SaPIAv | Protein | 1e-35 | 41 |
