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Name : HPSA20_0124 (HPSA20_0124) Accession : YP_008471090.1 Strain : Helicobacter pylori SouthAfrica20 Genome accession: NC_022130 Putative virulence/resistance : Resistance Product : aminotransferase class-V family protein Function : - COG functional category : - COG ID : - EC number : - Position : 113150 - 114292 bp Length : 1143 bp Strand : - Note : - DNA sequence : ATGCGCATGCAAACCAAATTGATCCATGGAGGCATTAGTGAGGACGCCACAACGGGGGCAGTGAGCGTGCCTATTTATCA AACTTCCACCTACCGCCAAGACGCCATAGGCCGCCCAAAGGGCTATGAATACTCTCGCTCAGGCAACCCCACACGCTTTG CATTAGAAGAGCTTATCGCTGATTTAGAAGGGGGGGTTAAGGGGTTTGCTTTTGCCTCTGGTTTAGCCGGGATTCACGCT GTCTTTTCGCTCTTGCAATCAGGCGATCATGTGTTATTGGGCGATGATGTCTATGGGGGGACTTTCCGCTTGTTTGACAA GGTGCTTTCTAAAAACGGGCTTTCTTGCACCATTATAGACACTAGCGATATTTCTCAAATACAAAAGGCTATCAAGCCCA ACACCAAAGCCCTTTATTTAGAATCCCCTAGTAACCCCTTGCTTAAAATCACAGATTTGAAGCAATGCGCCAATGTTGCT AAAACGCATGGCTTGCTCACTATCGTGGATAACACCTTTGCCACGCCTTATTGCCAAAACCCTCTTCTTTTGGGAGCGGA TATTGTAGTGCATAGCGGCACAAAATATTTAGGCGGGCATAGCGATGTGGTCGCTGGGCTTGTAACCACGAATAATGAAG CATTAACCCAAGAGATCGCTTTTTTCCAAAACGCTATTGGGGGGGTGCTAGGCCCTCAAGACAGCTGGCTGTTGCAAAGA GGGATTAAAACGCTAGCATTGCGCATGGAGGCTCATCAAAAAAACGCCTTTTATGTGGCTGAGTTTTTAGAAAAACACCC TAAAGTGGAAAAGGTTTATTACCCGGGCTTGCCCACTCACCCTAATCACGATCTAGCCAAAACTCAGATGCACGGTTTTA GCGGAATGCTTTCTTTCACTCTCAAAAACGACAACGAAGCGACTCTTTTTGCAGAAAGCCTTAAATTATTCATTTTAGGT GAGAGTTTGGGCGGGGTGGAAAGTCTGGTGGGTATTCCGGCGTTTATGACCCATGCGTGTATCCCTAAAGTGCAACGAGA AGCCGCAGGGATTAGAGATGGCTTGGTGCGCTTGTCTGTGGGGATTGAGCATGAAAAGGATTTGTTAGAAGATTTAGAGC AAGCGTTCGCTAAAATAAGCTAA Protein sequence : MRMQTKLIHGGISEDATTGAVSVPIYQTSTYRQDAIGRPKGYEYSRSGNPTRFALEELIADLEGGVKGFAFASGLAGIHA VFSLLQSGDHVLLGDDVYGGTFRLFDKVLSKNGLSCTIIDTSDISQIQKAIKPNTKALYLESPSNPLLKITDLKQCANVA KTHGLLTIVDNTFATPYCQNPLLLGADIVVHSGTKYLGGHSDVVAGLVTTNNEALTQEIAFFQNAIGGVLGPQDSWLLQR GIKTLALRMEAHQKNAFYVAEFLEKHPKVEKVYYPGLPTHPNHDLAKTQMHGFSGMLSFTLKNDNEATLFAESLKLFILG ESLGGVESLVGIPAFMTHACIPKVQREAAGIRDGLVRLSVGIEHEKDLLEDLEQAFAKIS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAS0418 | YP_042545.1 | Cys/Met metabolism PLP-dependent enzyme | Not tested | vSa¥á | Protein | 3e-101 | 54 |
| SAR0460 | YP_039909.1 | Cys/Met metabolism PLP-dependent enzyme | Not tested | vSa¥á | Protein | 5e-100 | 54 |
| metB | YP_281510.1 | cystathionine beta-lyase | Not tested | Not named | Protein | 1e-74 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HPSA20_0124 | YP_008471090.1 | aminotransferase class-V family protein | BAC0207 | Protein | 2e-63 | 43 |
