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Name : HPSA20_1130 (HPSA20_1130) Accession : YP_008472076.1 Strain : Helicobacter pylori SouthAfrica20 Genome accession: NC_022130 Putative virulence/resistance : Virulence Product : conjugal transfer family protein Function : - COG functional category : - COG ID : - EC number : - Position : 1069139 - 1070680 bp Length : 1542 bp Strand : - Note : - DNA sequence : ATGAAAAAATTTACCCTATCGCTATTTTTGTATTGCGCTTTACTTAGTGCTGAAGAGGATATTTTTAGGAACAACACAAA TGAAACTGATCTTACAAATTCTTTTGAACATGGCAAAGAAAACAACAATCTTATCCCAGCAAAATCTGATAGTTTAGAAA GTTTCAAAGAACAAGAAAACAAAGAAAAAGCCAAACAGCTTATGGATTTAAAAGCCTTACAGAGCGTGTATTTTTCTAAA AATAGAAAATTGCAAGACAATAATTTCAATGTCTTATATGTGGCAGGCAACACCAACAAAATCCGCTTACGCTATGCGAT GACTACCACCTTTATTTTTGATAATGATCCCATTATCTATGTGAGCTTAGGAGATCCTAGCGGTTTTGAACTCACTTACC CTACTAATGATCATTACGATTTATCCAACATGCTAGTGATCAAACCCTTGCTTATAGGGGTGGATACAAACCTAACTGTA GTCGGAGCAAGCGGGACAATTTATACTTTTTACTTGTTTAGCACCACTTACACCAGCAAGTTTCAAAGCTATTTTTCAGT GTTTGTCTCTAATAAAAGAGCTATCGGTAAGCTCAATATTTTGTCTAAGAGCGATCTAGAAAAAAGAGAGCAAGAACAAT TGGCTAAAACAGAAACAGATACGAATAGCTCTAATAAACAAGACAAGCAAAAGCTTGACTATAGAAAAATCAATTATGAG AGCAAGGAAATTGATGATGGCAAGTTTATAAGAATTGGAGATGAAGTCAATCACATTTTCATTGAAAAAGCTAAAATCAA TCGTGGTTATTTACAAAACCCCAAACACAAACGCACCTGGTGGAGTTTGTGGCTCTATAAAAAACCCAGTGATGACGCGC TTGATATAAAGGCGCTAGATGTCTTTGATGATGGCAAATACACTTATTTTAGATATGACAGAGATCAAGCCTTTTCAAAA TTTCCTTACACCTATAAGGTTGTAGATGGGTATGATAATCCTATCAATAGCCGTGTGGTAGGGAATTACATTATTGCTGA AGATGTTTCTAAAAAATGGACTTTAAGGAGCGGTAAGGAATATGTGTGCGTGAGAAGAGATAAGCACAAATACCAAAAAT CTAAGGACTTCATGCGTTTAAAAAGGCTTTTAGAGCAAGATGAAGCCATGAAAGTCAAACGAAATAACATGCATTTGATT GAAGACACTACGCCTCAACCTAAAAATGCCATTAGCGCAACGGAGTTGTTAGCTCAAATCAAAAACCAAACTCCAAGTAA AGAATGCCGAGCCTTAAATGAAGAAGAAGTTAAGACTTTAGAAAAGGTTAAAAACATCATAAAAGCTCCCAAGCCTTTGC AAAAAGATTTGAAAAAGAACGCTAAAAAACACACAATCAAAACCCAGTATTGCGTGCCTATCCCCTATATAGAAAGACTA AACACCATTGATGATTTAAAAAAGAATAAAAAGGAGCTGAATAACACCCCAAAACAAATTCAAGCAAACCCTATTAAAGA GATTAAAGAAAACAAGACATGA Protein sequence : MKKFTLSLFLYCALLSAEEDIFRNNTNETDLTNSFEHGKENNNLIPAKSDSLESFKEQENKEKAKQLMDLKALQSVYFSK NRKLQDNNFNVLYVAGNTNKIRLRYAMTTTFIFDNDPIIYVSLGDPSGFELTYPTNDHYDLSNMLVIKPLLIGVDTNLTV VGASGTIYTFYLFSTTYTSKFQSYFSVFVSNKRAIGKLNILSKSDLEKREQEQLAKTETDTNSSNKQDKQKLDYRKINYE SKEIDDGKFIRIGDEVNHIFIEKAKINRGYLQNPKHKRTWWSLWLYKKPSDDALDIKALDVFDDGKYTYFRYDRDQAFSK FPYTYKVVDGYDNPINSRVVGNYIIAEDVSKKWTLRSGKEYVCVRRDKHKYQKSKDFMRLKRLLEQDEAMKVKRNNMHLI EDTTPQPKNAISATELLAQIKNQTPSKECRALNEEEVKTLEKVKNIIKAPKPLQKDLKKNAKKHTIKTQYCVPIPYIERL NTIDDLKKNKKELNNTPKQIQANPIKEIKENKT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| virB9-1 | YP_002301099.1 | VirB9 type IV secretion protein | Virulence | cag PAI | Protein | 0.0 | 95 |
