Gene Information

Name : HPSA20_1125 (HPSA20_1125)
Accession : YP_008472071.1
Strain : Helicobacter pylori SouthAfrica20
Genome accession: NC_022130
Putative virulence/resistance : Virulence
Product : type II/IV secretion system family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1066051 - 1066992 bp
Length : 942 bp
Strand : -
Note : -

DNA sequence : 
ATGATTTCTAATCTTTTAAAAAGTTACCTTGATGACTTTATGCCTATTTTAAGCCAGCCTAATTTAAATGAAGTGGTTTT
TAATAAAGAAAAAGAGTATTTCTTGCACCGCCCAAAGGAAAAAGTGAGGTGTTTTAATGAAAAATTTACTAATGATTATT
TGTTAGTTTTTTGTGAGCAATTAGCCATTTTTAGAAACCAAAAATTCACTCTAAAAACGCCTAAGTTAAACACTTCTTTG
CCTTACACACAAATTAGAATTAACGCATTACACCCTAGCATTATTGCTAGTTCTAATATTTCTATCAATATCAGAGTGCC
TAGCAATTTCAAGTTTGAAATTAACGCCTTTAAATTAAGTGAGAAATGTCTGGCTAAAAACATTACCTATGATTTTTTAC
TTAGCTTAGTAAGTGCAGGTAAAAATATTTTAATCAGTGGTGGCACAGCTAGTGGTAAGACTAGTTTTGTTAATTCTTTG
ATTGAAAATATTCCTAAAAACGAAAGGGTGGTTACTATTGAAGATAGTCCTGAGTTAAAAATCAGTAACGAAGATCAAGT
TAATATTTTAGTGGATAAAAGTGGGAGCGGATTTTTTACTTATGAAGATGGCTTAAATGCGGCTATGAGAATGTCTCCTG
ATAGATTATTATTAGGCGAAATTGACACGCATAACACTGCGTTATTTTTGCGTTTAGCAAATACTGGGCATAGCGGAATG
ATAAGTACCTTACACGCTAATAGTGTGGTAGATGCTTTTATAGCTATTTGTCAGAATATAAACTTGAATAAAGGCGGTAA
GCCTACGCCTAAAGAAACGCTTTTAGATTATTTTTGCACTGGTATGGACTATGTTATCCAAATCAAAAAAAAAGGTAGCG
ATAGGATAATTGATGATGTTTTAAATGTTAAAAGCGAATTTAAAAAGGAGTTGATGTTATGA

Protein sequence : 
MISNLLKSYLDDFMPILSQPNLNEVVFNKEKEYFLHRPKEKVRCFNEKFTNDYLLVFCEQLAIFRNQKFTLKTPKLNTSL
PYTQIRINALHPSIIASSNISINIRVPSNFKFEINAFKLSEKCLAKNITYDFLLSLVSAGKNILISGGTASGKTSFVNSL
IENIPKNERVVTIEDSPELKISNEDQVNILVDKSGSGFFTYEDGLNAAMRMSPDRLLLGEIDTHNTALFLRLANTGHSGM
ISTLHANSVVDAFIAICQNINLNKGGKPTPKETLLDYFCTGMDYVIQIKKKGSDRIIDDVLNVKSEFKKELML

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
virB11-1 YP_002301094.1 VirB11 type IV secretion ATPase Virulence cag PAI Protein 6e-137 100

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HPSA20_1125 YP_008472071.1 type II/IV secretion system family protein VFG1979 Protein 8e-47 42