Gene Information

Name : HPSA20_1122 (HPSA20_1122)
Accession : YP_008472068.1
Strain : Helicobacter pylori SouthAfrica20
Genome accession: NC_022130
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1064755 - 1065312 bp
Length : 558 bp
Strand : -
Note : -

DNA sequence :
ATGCAAATTTATAAGCCTTATTGCTATATCATTTCTATTTTAGCCATTCCTTTTATTTTTTTAGGTGTATCGCATTATTT
CTTAGATTTTCCTAGTTTCTTAGCGAGTTATAACTATCTGAAAAAGATTATTCTTAATCTACATAATTTTCCCCATTTTA
AATTTGAGATTTATTTTTCATTCTTTTGTGCGTTATTACCGCTATTTTTGACAACCTACTTATTTTTTAATGGGCGCAAT
ATGGATAGTCATGGCAAGGCAGTTTGGGCTGAAATGAAAGATATTATTAAATACGAATATAGGATTTTTAATATTTTTAA
AGGATTGTTCTTAATTTTGTTTTTACCTCTAATGCTTGCTGTCTCTAGCTTTACGCTATTGCTTATTTTTATAGGGTGTA
TATTTTATAAAGTTTATCAATTTGCCAAGAAAAGACCCAAGGTTTTCTTTACGATCTTATCCTTTTTAGTAGTGATTTGT
GTCTTAATCTTTATGTTTAGGGGATTTTTAAGTGTAAAACTAACGCTATTTATGAAATATCTAAAAGGATTATTTTAA

Protein sequence :
MQIYKPYCYIISILAIPFIFLGVSHYFLDFPSFLASYNYLKKIILNLHNFPHFKFEIYFSFFCALLPLFLTTYLFFNGRN
MDSHGKAVWAEMKDIIKYEYRIFNIFKGLFLILFLPLMLAVSSFTLLLIFIGCIFYKVYQFAKKRPKVFFTILSFLVVIC
VLIFMFRGFLSVKLTLFMKYLKGLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HPP12_0455 YP_002301091.1 hypothetical protein Not tested cag PAI Protein 2e-55 97