|
Name : HPSA20_1114 (HPSA20_1114) Accession : YP_008472060.1 Strain : Helicobacter pylori SouthAfrica20 Genome accession: NC_022130 Putative virulence/resistance : Unknown Product : virC1 family protein Function : - COG functional category : - COG ID : - EC number : - Position : 1057715 - 1058377 bp Length : 663 bp Strand : + Note : - DNA sequence : ATGATAATCACCATAGCTAACGAAAAAGGGGGAAGCGGTAAATCCACTTTATGCTTGAACTTGTGCGTTCAATTATTACT AGACAAGAAAGATATTGTTGCATTAGACACTGATAGCCAAAAGAGTTTAGAAGTGTTCAATAATATTAGGAGTGAAACAA GTTTGCCCAATTTCACGCTCTTTAATCGCACAGGCAATATCACAGACACTTTAAAACAGATGATGGATAAATACGAATAC ATCCTTATTGATACTAAGGGCGAACATTCCAAAGAAAGCCAAAGGGCTATGCTATTGAGCGATTGGGTGCTAATACCCAC CACGCCAAGCCAACTAGACATAGCGGTGTTATTAGACATGCTAGAAAGGATTAGAGACATCCAAGCGTTGAATGAAAACT TAAAAGCTTGTATTGTGATGAACCGCATCCCTACCATCCCCACCCTTAAAGAGAAAAAAGCTCTCATTGATTTTATCCAC CAAAATAACGCTAACGAAAGCGTGTTTTTAATGGACAATATATTAAGCGAAAGGATAGCTTATAAGCGTTCAGTGAGTGA AGGTATGGGGGTAATGGAATACAATGACCATAAGGCTAAAAACGAATGGTCTCAATTCTATGATGAATTGAGTGGGTATT TAGGGGGCAAAAAAGCGGAATAA Protein sequence : MIITIANEKGGSGKSTLCLNLCVQLLLDKKDIVALDTDSQKSLEVFNNIRSETSLPNFTLFNRTGNITDTLKQMMDKYEY ILIDTKGEHSKESQRAMLLSDWVLIPTTPSQLDIAVLLDMLERIRDIQALNENLKACIVMNRIPTIPTLKEKKALIDFIH QNNANESVFLMDNILSERIAYKRSVSEGMGVMEYNDHKAKNEWSQFYDELSGYLGGKKAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| parA | YP_002301084.1 | chromosome partitioning protein | Not tested | cag PAI | Protein | 4e-88 | 98 |
