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Name : HPSA20_1113 (HPSA20_1113) Accession : YP_008472059.1 Strain : Helicobacter pylori SouthAfrica20 Genome accession: NC_022130 Putative virulence/resistance : Unknown Product : eco57I restriction-modification methylase family protein Function : - COG functional category : - COG ID : - EC number : - Position : 1049030 - 1057438 bp Length : 8409 bp Strand : + Note : - DNA sequence : ATGCAAAAAAAGAAAGCTAAAAACCCACAACCGAATTTATTTAGCGTCTTAGATAATGGCGGTATTGCCATAAGCAATCC TGCTGAAGAATCAGACAAGGTCAATGCAATACAAGATCCACTCCATTATGTCGTGAAAACTCAAATCAATACAGCAAGCA TGATTTCTAGAAATCCTATTGAATGGGCGAGGTATTTAAGCTTTGAAAAACGAGTGTATAAGGATAATAGTAAAGAAGAT GTCAAGTTCTTTGCTAATGGTGGGATAAAAGAAAGCTCTCGTGTTTATGAAGCGAATAAGGAAGGGTTTGAAAAGTGTGT AACTAAAAGATACGATCTGATTGATACCATCAGAAATAGAGAATTTCATTCAAGAGAAACTGAAATTCTAACCTACACAA ACAGCTTAGAAGAATTGAAAGAACAAGGTTTAGAAATCCAATTGACCCACCATAATGAAACGCATAAGAAAACCTTAGAA AATGGCAATGAAATCATTAAAGAATACGACTATCTTAAAGATATTTACCAAGAAGTAGAAAGGGAAACAAGAAATTACGG GGTAGTAAGGGAAATAGTCCCTAGTATGTCCAGTGATGAGCATTTTAAGCTCTATAACAAACTGCCTTTTGAATCAATAA ACAATGAAAACACCAAATTGAACACTAACGCCAATGAAGAAGTTAAAAAACTAGAATTTGAATTAGCTAAAGAAGTGCAT GCTTTAATCCTAGAGCAACAATTGCTTTCAGCAACAGATTATTATTCTTGGATAGATAAAGATGATTATGCGAGTTTTGC TTGGAAAATACATAGGCTTATCAATGAAAATAGACTCAAAGAAAATCATCTCAGTGCAGATAACGCTAATAAGATTAAGC AATTTTTCTTTAATAATGGTTTTATTTTAGGTTGGACTAAAGAAGAACAAAGCGCTATGCAAGAAAACAGAGATTATTCT TTAAGAAGCGCTCTTTTAAGTTTAGAAGAAATCGCTCAAGCAAAAATTGAATTGCAAAAATACTATGAAAGCGTTTATCT TAATGGTGATGGGAATAAAAGAGAAATCAAACCTTTTAAAGAAATCTTGAGAGACATCAACAATTTTGAAAAAGCTTATA AGGAGCGTTATAACGAATTGGTAAGTTTGAATGAAGCAATCATTCAAGCTAAAGAGAGCAGTAATGAGCGACAAAATTCT AACGCAAATAACAATAACACTATTAACAATACAATAAAGCATAATACTTCTATTGGTAACAATATTGTTCAAAATAATGA TAATAATCATCTAAATTTAAGCATGGTTGATTTAGAATTAGAGCAACAAAATTTAGGAGAACCAAATGGAAAAGAAAGAA CAAATCGTGCAGATGAGCCGAGCAGAGCTAGAGCGGGAATTCCGCAAGAAATTCACCGCAGAAGCGAACATGGAGGACAG CAAGAGAGAGTGGAGCGATCGAGTGATGAAGAATTTTCACACCAAGACCCTAGTTTATTTATTGAGCCTAGAGAGCAGAG AGAAACAAGAGGAATTTATAGATCTAGCGACCAACAGGCAGTTTCAGAAAAACCCCATAGAGAGCGAGATAGATTACATG AACATGTATCTAGAGGAGATGGAGTATCAGCAAGAACAGATAGCAATGGAGCATCAAGTCAAGCAAGCCGAATGGAAAAT GGAGCAAGAAGCGAAGAAAAGAGGGATAATCCCAGCGATGAGAGAGGAGTATCACAGCCACCGCAATCCCAAGCTCATCA ACAAAATAGCTCCAGAGATTTGGGGCTTTCTCTCTCTAGAGAACAGCCAGGACAGACTGGACGCTTACGCCTTTTTGATC ATGGACAGATGGGTTCATTATTTCCCACAGACCATGAAAACCAAAGATCAAAGAACGATAATAAGCTTGATAAAAGCAGT GATAGAGCAAACGAAAATGGAGACAGAAGCCCTAGACAGAATGGAAGCGCAAATCAAGAGGGCGCAAGGGGTGAGCGATA TGGAATTGCTCAAGGAAGCTCAAATCAATCAATATTACCACCTACTCAAAGCCAATTATATCCTGCAGGACTCAGCGCAT CAAATGGACTTGGAAACCTTGAAAAAAACAGGGATCAAGAGAGAGGACTTTTATCAAATTTAGACAATTTAAAAGGCTTG CTTAACGCTATTCAAAACAACACCATAGCAAATGAGCCTAACTTTAGATCTAGGCTCTTAGAAGCCATTCAAAACAACGA GCCTTTAAAAGATAGTATTGTAGGGACACAACTCCTTAAAGACCCTACGACTAAAGTCTTTTATGACAAATTCCAATTAA AAATCAGCTCCACAAAAATCTTAGAGATTTTAGAAAATCGCATTCAAAAATCCATTGAAACAACGAATGAAACCTTAAAC GCATTCAATGCACTGGATAGTCAAGCCATTGATAAAAACGCTATCTATAATAGCGTAGGATTAAAACCCACGCAAGAGAG TGAAATAACAGATAATAGCGTAGAGTTTAATAACGCTCAAGAGCAAGACACACAAGAAAACGCACAAACCACGCTAAAAC AAGAAACGCAAGAGCAAGAAACACCAACCACGCCATCCATCGCCCTTAATCCTAAAATAGATTTTAAACCGAGCGAAGAA GTTTTAATTAAGGGAGCTAAAAACCGCTATAAGGCTAACATTAAAGCCATTGAACTCTTAAAAGAATTGCAAGCCAAACA AGAGATCTTAAAAGGCGATTATCACGCCACTCAAGAAGAGCAAGAAATCCTAGCGCAATTTAGCGGATGGGGTGGGTTAG AAAGCTACTTTAAAAAGGATCAACACCCTGAAGAATTTAAAGAATTAAACGCCTTACTCACTAAAGATGAATTTAGAAGA GCTTATTCAAGCACAAGAGACGCTTATTACACCCCTAAATTAGTTATTGATAGCATTTATCAGGCTTTAGATCAATTAGG GTTTAATAACGATAACCATCAAAAAGAAATCTTTGAACCCAGTTTAGGCACAGGTAAATTCATCGCTCATGCACCAAGCG ATAAGAATTACCGCTTTATCGGCACAGAATTAGATCCTATTAGCGCTAATATTTCTCAATTCCTTTACCCTAATCAAACC ATAAACCACGCCGCCTTACAAAACCACACTTTCTACCAAGACTATGATGCGTTTGTGGGCAATCCTCCTTATGGCAATCA TAAAATCTATAGCTCCAATGACAAGGAATTGAGTAACGAGAGCGTTCATAATTACTTTTTAGGTAAAGCTATCAAAGAAT TAAAAGATGATGGCATAGGGGCGTTTGTGGTGAGTTCTTGGTTTATGGATGGTAAAAACCCTAAAACGAGGGAATACATC GTGCAAAACGCCACTTTTTTAGGAGCGATAAGATTGCCTAATAGCGTGTTTAAAGCAACAGGCGCTGAAGTGAGTAGCGA CATTGTGTTTTTTAAAAAAGGCGTTGATGAAGCAATCCATCAAAGCTTCACTAAAGCTATGCCTTATTATGGCAAGATCA TTGATAGCTTGGATGATGACACCCTTTTTGCCTTGCAAAACAACCGCTTTGATAGTTTTATCCCTAGCGACCAACTTAAG ATCGTCAATGCGATTGCAAGCCATTTTGGTTTCAAACAAGAAAAATTGCAACATTGGTATGAAAAAATAGACACCACTAA CTTTAGCTACAGCGAACAAGACTATAAGATCATCAAAGATTTCATTGATAAAGTTGGCGAGAATAATATCAATCTCAACG AGCAAACTCTAAATGAATACTTTATCAACCACCCTGAAAACATTCTAGGGCATTTGAGTTTGGAAAAAACCCGCTATAGC TTTGAAATCAATGGCGAACAAATTTATAAATACGAATTGCAAGCCTTAGAGAATAAAAGCTTAGATTTATCCCAAGCTCT TAGCCAAGCGATAGAAAAATTGCCTAAAGATGTCTATCAATACCATAAGACTACCCTTAAAACAGACGCTCTCATCATTG ATGCAAATAACGAACGCTATCAAGAAGTTCAAAAGCTTATCAAGAATTTAGCAAGGGGAGAATTAGTCAAGTGGGATAAT CTTTATTACCAACTAGAACAAAATAATGAAATGGGTATTTTTTTAAGACCCACTAAAATCAACTCTAAAGCCCAAGATTT ACGAATAAAAGCCTATTTTAAAATTAAAGACGCTTTGAATGATTTAACGAGTGCGGAATTAAACCCCTTAAGCTCTGATT TAGAGCTAGAAAGTAAAAGAGCCAAGCTCAATCTTGTTTATGATGAATTTGTCAAGAAATTTGGCTATCTCAATGAGAAT AGAAACCGCAAGGACATCAAACAAGATTTGTATGGTGCTAAAGTCTTAGGATTAGAAAAAGACTTTGAAAAAGAAATCAC CGCTAGAAGCGCTAAAATGCAAAACATAGAGCCAAGGCAAGCTCAAGCTAAAAAAGCTCAAATCTTTTTTGAAAGGACTT TAAACCCTAAAAAAGAATTTATCATTACTAACGCTAAAGAGGCATTAATTACTAGCATCAATCAAAAAGGGGGTTTGGAT TTGCATTTCATTAGGGATCATTTTAAAACCCAAAGCTTAGAAACCACGATTAAAGAACTTTTAGAGCAAAAACTTATCTA TAAAGACCATAATAACAATGGCGACTATATTTTAGCGAACGATTATTTGAGTGGTAATGTGAAAAGAAAACTCAAAGAAG TTAAAGACGCCATCAATCAAGGCGTGGAGGGATTAGAGGTTAATTTGCAAGATTTAGAGCTGATTATCCCTAAAGATTTG AAAGCCACTGAAATCATGGCTAATATCAACAGCCCTTGGATACCCACCCAGTATTTAGAAGAGTTTTTAATAGAATTAGC CGCCAACCATTATGAAAAGCAATACGGCGATAAAATGACAGATTACCAACTGGGCAATCTCAAAGAATACATTAAAGTAG AACACATAAGCGGTGCTTGTGAAGTTTTTGCTAGGAACAATGAATTAAACGAGCTTTATGGCATCAGGCATAAAGACAAA CCGCATTCTTATAAAGTGCCTTTTGAAAGTTTTTTAAACAAAGTCTTAAATAACAAGGATTTGAGCGTTAAATACACCCA AGTTGATCCTAATGACCCTAAAAAAGAAATCTTTATCACTGATGAAGAGCAAAGCAATCTTGCCAGACAAAAAGCAGAAG AATTGAAAGAAGCTTTTAAAGACTGGATTTATAAGGATTATACAAGAAGAACCTATTTAGAGCAAATCTATAATGACACT TTCAATAACTCTGTTTTAAAAACCTATGATGGCTCGCAATTAGAACTAGAGGGCTTTAATCAGTATATCAGCTTACGACC CCACCAAAAGAACGCTATTTTTAGAACGATCCAAGACAGGGCGGTGTGTTTAGACCATCAGGTTGGAGCAGGCAAGACTT TGTGCGCTATAGCCAGTTGCATGGAACAAAAACGCATGGGATTAGTGAATAAAACGCTCATTGCCGTGCCTAACCATTTA ACCAAGCAATGGGGCGATGAATTTTATAAGGCTTACCCTAACGCTAATGTGTTGGTTGTTGATAGCAAGGACATCACTGA AAAAGAAAGAGAGCTTTTATATAATCAAATCGCTAACAACAATTATGACGCTGTGATTATCGCGCACACCCATTTGGAAT TGTTGTCTAACCCTAGAGAAATCATAGAAGAATTGAAAGAAGAAGAGCTAGTGAATGCTGAAAAAAACTTTGAAAGGCAA GAACTGGCCTACAAAAATAACCCCAGAGAAACTAAAAAACCCAATGAAAGAGCCTTTAAAAACAAGCTAGATAAAATCCG CAATAAATACGATGCGATTTTAGAAAAACAAGGCTCTTATATTGATATTGGTCAAATGGGGATTGATAATTTGATTGTGG ATGAAGCCCATTTATTCAAAAATCTAGCCTTTGAAACTTCTATGGAAAAAATTGCAGGGCTTGGCAACCAACAAGGCTCT AATCGCGCTAGAGATTTGTTTATTAAAACACGCTACTTGCATCAAAACGATAAAAAGATCATGTTTTTAACCGGCACGCC TATAGCTAATTCCTTGAGTGAAATGTATCACTTGCAACGCTACCTAACCCCTGATGTCTTAAAAGAAAGAGGGTTAGAAT TCTTTGATGATTGGGCTAAGACTTATGGGGAAGTGGTGAATGATTTTGAATTAGACACTTCCGCTCAAAGTTATAAAATG GTTAATCGCTTTTCTAAATTTAGCGATGTGCAAGGCTTAAGCACCATGTATAGAGCCTTTGCGGATATTGTCTCCAATGA TGATATTTTAAAACATAACCCCCACTTTGTGCCTAAAGTGTATGGGGATAAACCTATCAATGTGGTGGTGAAAAGAAGCG AAGAAGTGGCTCAATTCATTGGCGTTGCTGATGAAAATGGTAAATATAATGAAGGCTCTATCATTGACAGGATGCAAAAA TGCGAGGGCAAGAAAAGCAAAAAAGGGCAAGACAATATCCTTTCTTGCACCACAGACGCTAGAAAAGTGGCTTTGGATTA CCGCTTGATTGACCCTAACGCTAAAGTAGAAAAAGAATTTTCTAAAAGCTATGCTATGGCAAAAAATATCTATGAGAATT ATTTAGAAACTAATGCTACTAAAGGCACACAACTTGGTTTCATAGGGCTATCCACACCCAAAACCCATAGCCAAAAGGTG AGTTTAGAAGCGTTAGATAACGCTCATGAGATAGAAAACAAAAATCCCCTAGATGAAGCTCAAGAGCTTTTAGAGAGCTT GTCTAGTTATGATGAAAATGGCAATCTTATCGCTCCTAGCAAGAAAGAATTAGAAAACGAACTCAAAGAGAAAGAGGCTA AAAGCATCAATTTAGATGAAGAGCTAGCTAAAGGCTGTAAGTTTGATGTTTATAGCGATGTTTTAAGGCATTTAGTCCAA ATGGGTATCCCACAAAATGAAATCGCTTTCATCCATGACGCTAAAACCGAAGAGCAAAAGCAGGATTTGTTTAAAAAGCT CAATCGTGGCGAAGTCAGGGTCTTATTGGGCAGTCCTGCTAAAATGGGCGTAGGCACTAATGTGCAAGCTAGATTAGTCG CTATGCATGAATTAGATTGCCCATGGAGGCCTGATGAATTGTTGCAAATGGAAGGGCGTGGGATAAGACAAGGCAATATT TTACACCAAAATGACCCTGAAAATTTTAGAATGAAAATCTATCGCTACGCCACTGAAAAGACTTATGATAGCCGTATGTG GCAAATCATAGAAACTAAATCTAAAGGCATAGAGCAATTTAGAAACGCACACAAATTAGGTTTGAATGAATTAGAAGACT TCACTATGGGAAGTTCTAATGCGAGCGAGATGAAAGCAGAAGCGACAGGCAATCCGTTGATTATTGAAGAAGTCAAATTG AGGGCTGAAATCAAAAGCGAAGAAGCAAAATACAAAGCTTTCAATAAAGAGCATTACTTCAATGAAGAGAATTTGAAAAA CAACGCTTCTAAACTTGATTTTTTACACAAGGAATTGAAAGATTTAGAAACGCTTCAAAGCTCTGTAATGATCCCCACTC ATACAGAGATCAAGCTCTATGATTTGAAAAATGAAGAAAGTAAGGATTATGAGCTTATCAAAGTTAAAGAAGTAGAGCCT TTAAAAGAAAACGCCTCTATGAGCGAAGAATTAACGCACAAGAAACTCAAAGAACAAAACAAGCAAATAACCGAACAAAA TAAAGAAAAGCTAGACGCTATTAAAAAGCAATTTGCAAGCAATTTGAACGACTTGTTTTTCAATGAAGAAAGAGATTGTA AGCTTTTAGAATACAAGGGCTTTGTGGTGAATGCTTATAAAACTAAGTATCAAGTGGAGTTTAGTTTAAGCCCTAAAGAC AATCCAAAAGTATCCTATAGCCCTAGCAATATGGTTTATAAAAACGATACGGGCAACATGTTTAGCTCTTATAATTTCTG CGGTGAGATTAAATTTGATGGGTTTTTAAAGAGACTGGATAACGCTATCACTAAACTCCCTGAAAAAATCAAGGAATTAG AAAATTCCATTGAAACCACTCAAGAAAATATTGCTAAATACACAAGATTAGTGGAGCAAAAACCTCCTTACCCACGACTA GAATACTTGCAAACTTTAAAATTGGATCATAAAACTCTAATAGATGACTTAGCTAAAATGGGCAAAGACAGAGATTATAA GCCTGTGTTCAACCCTAAATCTAAAGAAGTCTTAGAAAAAATGAACGCTAAAAAAAGAGCGAGTTTAGAGAATGAGAGCG TAACAGAAGAGATAAAAGAACAAGCCAACCAAGAAGTGCATAGACCAATGAAAAAAGCGGCTAATGATGATTACGACATG GGAATGTGA Protein sequence : MQKKKAKNPQPNLFSVLDNGGIAISNPAEESDKVNAIQDPLHYVVKTQINTASMISRNPIEWARYLSFEKRVYKDNSKED VKFFANGGIKESSRVYEANKEGFEKCVTKRYDLIDTIRNREFHSRETEILTYTNSLEELKEQGLEIQLTHHNETHKKTLE NGNEIIKEYDYLKDIYQEVERETRNYGVVREIVPSMSSDEHFKLYNKLPFESINNENTKLNTNANEEVKKLEFELAKEVH ALILEQQLLSATDYYSWIDKDDYASFAWKIHRLINENRLKENHLSADNANKIKQFFFNNGFILGWTKEEQSAMQENRDYS LRSALLSLEEIAQAKIELQKYYESVYLNGDGNKREIKPFKEILRDINNFEKAYKERYNELVSLNEAIIQAKESSNERQNS NANNNNTINNTIKHNTSIGNNIVQNNDNNHLNLSMVDLELEQQNLGEPNGKERTNRADEPSRARAGIPQEIHRRSEHGGQ QERVERSSDEEFSHQDPSLFIEPREQRETRGIYRSSDQQAVSEKPHRERDRLHEHVSRGDGVSARTDSNGASSQASRMEN GARSEEKRDNPSDERGVSQPPQSQAHQQNSSRDLGLSLSREQPGQTGRLRLFDHGQMGSLFPTDHENQRSKNDNKLDKSS DRANENGDRSPRQNGSANQEGARGERYGIAQGSSNQSILPPTQSQLYPAGLSASNGLGNLEKNRDQERGLLSNLDNLKGL LNAIQNNTIANEPNFRSRLLEAIQNNEPLKDSIVGTQLLKDPTTKVFYDKFQLKISSTKILEILENRIQKSIETTNETLN AFNALDSQAIDKNAIYNSVGLKPTQESEITDNSVEFNNAQEQDTQENAQTTLKQETQEQETPTTPSIALNPKIDFKPSEE VLIKGAKNRYKANIKAIELLKELQAKQEILKGDYHATQEEQEILAQFSGWGGLESYFKKDQHPEEFKELNALLTKDEFRR AYSSTRDAYYTPKLVIDSIYQALDQLGFNNDNHQKEIFEPSLGTGKFIAHAPSDKNYRFIGTELDPISANISQFLYPNQT INHAALQNHTFYQDYDAFVGNPPYGNHKIYSSNDKELSNESVHNYFLGKAIKELKDDGIGAFVVSSWFMDGKNPKTREYI VQNATFLGAIRLPNSVFKATGAEVSSDIVFFKKGVDEAIHQSFTKAMPYYGKIIDSLDDDTLFALQNNRFDSFIPSDQLK IVNAIASHFGFKQEKLQHWYEKIDTTNFSYSEQDYKIIKDFIDKVGENNINLNEQTLNEYFINHPENILGHLSLEKTRYS FEINGEQIYKYELQALENKSLDLSQALSQAIEKLPKDVYQYHKTTLKTDALIIDANNERYQEVQKLIKNLARGELVKWDN LYYQLEQNNEMGIFLRPTKINSKAQDLRIKAYFKIKDALNDLTSAELNPLSSDLELESKRAKLNLVYDEFVKKFGYLNEN RNRKDIKQDLYGAKVLGLEKDFEKEITARSAKMQNIEPRQAQAKKAQIFFERTLNPKKEFIITNAKEALITSINQKGGLD LHFIRDHFKTQSLETTIKELLEQKLIYKDHNNNGDYILANDYLSGNVKRKLKEVKDAINQGVEGLEVNLQDLELIIPKDL KATEIMANINSPWIPTQYLEEFLIELAANHYEKQYGDKMTDYQLGNLKEYIKVEHISGACEVFARNNELNELYGIRHKDK PHSYKVPFESFLNKVLNNKDLSVKYTQVDPNDPKKEIFITDEEQSNLARQKAEELKEAFKDWIYKDYTRRTYLEQIYNDT FNNSVLKTYDGSQLELEGFNQYISLRPHQKNAIFRTIQDRAVCLDHQVGAGKTLCAIASCMEQKRMGLVNKTLIAVPNHL TKQWGDEFYKAYPNANVLVVDSKDITEKERELLYNQIANNNYDAVIIAHTHLELLSNPREIIEELKEEELVNAEKNFERQ ELAYKNNPRETKKPNERAFKNKLDKIRNKYDAILEKQGSYIDIGQMGIDNLIVDEAHLFKNLAFETSMEKIAGLGNQQGS NRARDLFIKTRYLHQNDKKIMFLTGTPIANSLSEMYHLQRYLTPDVLKERGLEFFDDWAKTYGEVVNDFELDTSAQSYKM VNRFSKFSDVQGLSTMYRAFADIVSNDDILKHNPHFVPKVYGDKPINVVVKRSEEVAQFIGVADENGKYNEGSIIDRMQK CEGKKSKKGQDNILSCTTDARKVALDYRLIDPNAKVEKEFSKSYAMAKNIYENYLETNATKGTQLGFIGLSTPKTHSQKV SLEALDNAHEIENKNPLDEAQELLESLSSYDENGNLIAPSKKELENELKEKEAKSINLDEELAKGCKFDVYSDVLRHLVQ MGIPQNEIAFIHDAKTEEQKQDLFKKLNRGEVRVLLGSPAKMGVGTNVQARLVAMHELDCPWRPDELLQMEGRGIRQGNI LHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHKLGLNELEDFTMGSSNASEMKAEATGNPLIIEEVKL RAEIKSEEAKYKAFNKEHYFNEENLKNNASKLDFLHKELKDLETLQSSVMIPTHTEIKLYDLKNEESKDYELIKVKEVEP LKENASMSEELTHKKLKEQNKQITEQNKEKLDAIKKQFASNLNDLFFNEERDCKLLEYKGFVVNAYKTKYQVEFSLSPKD NPKVSYSPSNMVYKNDTGNMFSSYNFCGEIKFDGFLKRLDNAITKLPEKIKELENSIETTQENIAKYTRLVEQKPPYPRL EYLQTLKLDHKTLIDDLAKMGKDRDYKPVFNPKSKEVLEKMNAKKRASLENESVTEEIKEQANQEVHRPMKKAANDDYDM GM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| HPP12_0447 | YP_002301083.1 | DNA methylase | Not tested | cag PAI | Protein | 0.0 | 90 |
