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Name : HPSA20_1106 (HPSA20_1106) Accession : YP_008472052.1 Strain : Helicobacter pylori SouthAfrica20 Genome accession: NC_022130 Putative virulence/resistance : Unknown Product : phage integrase family protein Function : - COG functional category : - COG ID : - EC number : - Position : 1040528 - 1041604 bp Length : 1077 bp Strand : + Note : - DNA sequence : ATGAAAAAATCAAATGATAACAACGCACTCGCTAGAAGTCAAAGGGAGTTATTTGTAGGGATTAGGGATTTTATTGTTTT TAAATTTAAGCGTATGGTTGTTTTTAATGGGGTAAGGGATTTTACAAAAATGAGATTTTTGTCCATAGAATTAGAAAAAT GCGAAAATATTAAAGATTTGGAAAAATTATGTCATACAATTTATAATCAAGGCACAAAGCATATTTTGATGATGCGTGTA TTGTTTTTATTTTTTGACTATTTTTGCAAGCATTTGAAAGTTAAGCGATTGAGATTACTCAATGAAGAAATGCTGGTGAA TTTTTTATTTGAGTTAGCCAAACAAAGAAAGATTAATTCAATGGCAAAATATGTGATGTATATAAGGCAATTTTTTGATT ACTTGGATAGGACCAAGCATTATGAATTTTATTTTAGTCTTAAAAATATAGCCTTTGCTAAACATAGGGATAATTTGCCT AAACATCTAAACTCAAAAGATTTAAAATCTTTTATATGTACTCTTATAAACTATAGAACTAGAAGTAGTTATGAAAAGAG AAATAAGTGTATTTTGCTCTTAATTATTTTGGGTGGTTTGAGAAAATCTGAGGTTTTTGATTTAGAATTGAGAAATATTG TTTTAGAAAAAGAGCATTATATCTTGCTTATAAAAGGCAAAAACAATAAAGAACGAAAAGCGTTCATTAAACGAGAAATG CTAGAAAAATCTTTAGATGAGTGGTTGAGCGATAGTAAACGATTGAGTAGTTTTAATGGGCGTTTTATATTTAAGAAATC TTTGTCTAACTATACTCAAAAGCATTGTTCAATCAGTAATTTTGTGTTAAAGATTTTTATGTTGAGTGGTATTGAAAATT TTAAACAATATGGTACAGGATTGCACCTATTTAGGCATAGTTTTGCCACTTTAGTCTATGATGAGAGCAGGGATATTGTT TTGACTTCAAGGGCGTTAGGGCATCAGTCCTTAAGCTCCACAAAAATCTACATTCACACCGCACAAGAATATAATAAACA AGTAGCAAGCATTTTTGATAATTTATTGAGTGAGTGA Protein sequence : MKKSNDNNALARSQRELFVGIRDFIVFKFKRMVVFNGVRDFTKMRFLSIELEKCENIKDLEKLCHTIYNQGTKHILMMRV LFLFFDYFCKHLKVKRLRLLNEEMLVNFLFELAKQRKINSMAKYVMYIRQFFDYLDRTKHYEFYFSLKNIAFAKHRDNLP KHLNSKDLKSFICTLINYRTRSSYEKRNKCILLLIILGGLRKSEVFDLELRNIVLEKEHYILLIKGKNNKERKAFIKREM LEKSLDEWLSDSKRLSSFNGRFIFKKSLSNYTQKHCSISNFVLKIFMLSGIENFKQYGTGLHLFRHSFATLVYDESRDIV LTSRALGHQSLSSTKIYIHTAQEYNKQVASIFDNLLSE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| HPP12_0437 | YP_002301073.1 | integrase/recombinase XercD family | Not tested | cag PAI | Protein | 2e-89 | 57 |
