Gene Information

Name : HMPREF0669_01623 (HMPREF0669_01623)
Accession : YP_008470581.1
Strain : Prevotella sp. F0039
Genome accession: NC_022124
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase pdxS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 419369 - 420244 bp
Length : 876 bp
Strand : -
Note : -

DNA sequence :
ATGAAGGAAAACAGACAAAGTCTTAATCGAAATTTAGCTCAAATGCTAAAAGGTGGAGTTATTATGGACGTAACAACTCC
AGAACAAGCACGTATTGCAGAAGCCGCAGGTGCATGTGCAGTTATGGCGCTAGAACGTATTCCAGCAGATATTAGAGCAG
CTGGTGGTGTTGCACGTATGAGCGATCCAAAAATGATTAAGAGCATACAAGAAGTTGTTAGTATTCCTGTTATGGCAAAA
TGCCGTATAGGCCACTTTGCAGAAGCTCAAATACTTCAAGCAATTGAGATAGATTATATCGATGAAAGTGAAGTTCTTTC
ACCAGCAGACAACATCTATCACATCAACAAAAATGAGTTTACAGTTCCTTTTGTTTGTGGTGCTAAGGATTTAGGAGAGG
CTCTTCGCAGAATAGCAGAAGGCGCAACAATGATTAGAACCAAAGGAGAACCAGGAACAGGAGATATCATTCAGGCTGTA
CGTCATATGCGTATGATGCAAAGTGAGATTCGTCGTATCGTGTCATTAACCGAAGGTGAGTTATTCGAAGCAGCAAAACA
ACTACAATCTCCTTATGAATTAGTGAAGTATGTTCACGATAATGGTAAGCTACCTGTTGTTAATTTTGCTGCTGGTGGTG
TTGCTACTCCTGCAGACGCAGCATTGATGATGCAATTAGGAGCAGAAGGTGTATTCGTTGGAAGTGGTATCTTCAAGAGC
GGAAATCCAGAGAAACGTGCTGATGCAATTGTGAAAGCTGTTACTAACTATAAAGACGCTAAGATGATTGCAAAGCTCTC
TGAAGATTTAGGAGAAGCTATGGTTGGTATCAACGAGCAAGAGATTGAGTTGTTAATGGCTGAAAGAGGCAAATGA

Protein sequence :
MKENRQSLNRNLAQMLKGGVIMDVTTPEQARIAEAAGACAVMALERIPADIRAAGGVARMSDPKMIKSIQEVVSIPVMAK
CRIGHFAEAQILQAIEIDYIDESEVLSPADNIYHINKNEFTVPFVCGAKDLGEALRRIAEGATMIRTKGEPGTGDIIQAV
RHMRMMQSEIRRIVSLTEGELFEAAKQLQSPYELVKYVHDNGKLPVVNFAAGGVATPADAALMMQLGAEGVFVGSGIFKS
GNPEKRADAIVKAVTNYKDAKMIAKLSEDLGEAMVGINEQEIELLMAERGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-85 70
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 3e-85 69
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 3e-85 69