Gene Information

Name : HMPREF0669_01552 (HMPREF0669_01552)
Accession : YP_008470279.1
Strain : Prevotella sp. F0039
Genome accession: NC_022124
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 30478 - 33012 bp
Length : 2535 bp
Strand : -
Note : -

DNA sequence :
ATGACCAATCAATTCTCACCAAGAGTGTCTGAGATCCTTGCTTTCAGTAAAGCAGAAGCCTTAAGGCTTGCTAGTGGATC
GATAGGTCCAGAACATTTGTTGCTAGGAATAATAAAGGATAACAATCAATATATCAACAACTTATTCACAGAAAAGCGTA
TAAATAAAGACGACATTAGAGCGCAACTCGAAGAAAAGATACAAAACGAAAACAGCTCTAACACACTTTTCAGCACAGAT
GTTGCCCTTAACGACAAAGCAAACAACATCTTAAAACTTGCAATTGTTGAAGCACGACTCCTTCATTTGCAAATAGTTGA
TATTCAACACGTCCTCTTAGCCATTCTACACGATAGCTATTTAAACAACGCTAAAATTGTTTTAGAATCGAACAATATGA
ACTACGATAATACAAAAGAATTTCTATATCCCAGTACTAAACCTCAAACCGATGGACTAGAGCTATCTGGAGACGAGGAA
GAAGAACTATCTGAAGACAACAATTTTAGTTCTTCTCGCCGTGAAAGTGCAGGAAGTACTACCACAAAAACAGAACAAAC
AAAAAGTAAAACACCTATACTCGACAACTTTTCTACCGACTTAACCAAGGCGGCAAGCGAGGGATTACTTGATCCTGTGG
TAGGAAGAGAGCGTGAAATTCTACGTCTTGCAGAGATTCTTTGTCGTAGAAAGAAAAACAATCCTATACTTATAGGTGAG
CCAGGTGTGGGCAAAAGTGCCATTGTTGAAAATCTTGCGCAACTTATTGTTCAACGAAAAACATCTCCTGTGCTATTTAA
TAAAAAGATTGTAGCACTCAACATGGCATCTATTGTGGCAGGAACGAAGTATCGTGGACAATTTGAAGACCGCATTAAAG
CCTTACTGAAGGAATTGAAAGAGCATCCCGAAATAATTGTATTTATCGACGAAATACACACAATAATTGGTGCAGGAGGA
ACTCCAGGCAGTATGGATGCAGCCAATATCATGAAACCTGAGTTGGCAAGAGGAGGTATTCAATGTATTGGAGCCACCAC
TCTTGATGAATATAGAAACAGCATTGAGAAAGATGGAGCATTGGAACGACGTTTCCAAAAGATTATCATTGAACAAACAA
CAGCACAAGAAACGCTACAAATTCTATCGAACATAAAGGATAGATACGAACAACATCACCACGTTCAATACACTGACGAT
GCCTTAAAAGCATGCGTCAATCTGTCAGAACGATATATTAACGACCGCTTTTTCCCTGATAAAGCAATCGATGTGATGGA
CGAAGTGGGTTCGAAAGTGCACTTGCGCAACCTAAAAGTGCCCAAAGAGGTTGAAGAAAAGGAAAAAGAAATAAAAGAAG
CAAATGCTAAGAAAACCACAGCTGTTAAGAATCAGAACTATGAACTCGCTGCCAATTATAGAGATAAGGTGTGCGCTTTA
GAAAAAGAACTCGACGAATTGAACGCAGCTTGGACTAAAGGTGAATACAAAGACATTGATATCGTAACCGAAAAGGAAGT
GAGCGAAACGGTATCTATAATGACTGGTGTTCCTGTTGAACGCATTGCAGAAGCTGAAGGCAGTAGACTTAAAGCGATGA
GCGACACACTTAAGAAAACAGTTATTGCACAAGACAACGCTATCGACAAAGTTGTAAAAGCTATTCAACGCAATCGTGTA
GGCTTAAAAGACCCTAATCACCCTATCGGAGTGTTCATGTTCTTAGGTCCAACGGGTATTGGCAAAACACATTTAGCTAA
GAAGTTGGCTCAAATTATGTTTGGTTCTGACGATGCTTTGATAAGAATAGACATGAGTGAATATAGCGAAGGCTTTAACA
CTTCACGCTTAATTGGTGCCCCTCCAGGGTATGTTGGTTACGAAGAAGGTGGACAATTAACCGAAAAAGTGCGCAGAAAG
CCCTACTCTATCATTCTGCTCGACGAAATAGAAAAGGCTCATGGCAATGTATTCAATATGCTTTTGCAAGTGTTAGACGA
AGGTCGTTTGACTGATGGAAATGGTAGAATTGTTGATTTTCGTAACACAATTATCATCATGACCTCAAATGCTGGTACTC
GACAACTTAAAGATTTTGGACGAGGTGTGGGCTTTAACGCTGGCGGTTCGTTTGGAAGTGATATCAACGAAAGTGACAAA
GAATATGCAAGAGGAATTATTCAAAAGAGCTTAAGCAAACAATTCGCTCCTGAATTTTTAAACCGTCTCGACGAAATTGT
GATGTTCGATCAACTCGATCTCGATGCGATTCTAAAGATTACCGATATCGAACTTGCTTCGCTAACAAAGCGAATTGAAC
AAATTGGCTACCAGATTGAAATATCAGATAAGGCTAAAGAGTTCGTTGCTAAAAAGGGTTATGACGTTCAATTTGGTGCT
CGTCCACTTAAAAGAGCCATTCAAACCTATATTGAAAATGGTATTTCAGAGCTTATTTTGTCTGAGAGTATCAAACTTGG
AGATACTATCTCGGTTGGAAAAGTGCCCAATAAAGAAGAGCTTAGCTTTAAATAA

Protein sequence :
MTNQFSPRVSEILAFSKAEALRLASGSIGPEHLLLGIIKDNNQYINNLFTEKRINKDDIRAQLEEKIQNENSSNTLFSTD
VALNDKANNILKLAIVEARLLHLQIVDIQHVLLAILHDSYLNNAKIVLESNNMNYDNTKEFLYPSTKPQTDGLELSGDEE
EELSEDNNFSSSRRESAGSTTTKTEQTKSKTPILDNFSTDLTKAASEGLLDPVVGREREILRLAEILCRRKKNNPILIGE
PGVGKSAIVENLAQLIVQRKTSPVLFNKKIVALNMASIVAGTKYRGQFEDRIKALLKELKEHPEIIVFIDEIHTIIGAGG
TPGSMDAANIMKPELARGGIQCIGATTLDEYRNSIEKDGALERRFQKIIIEQTTAQETLQILSNIKDRYEQHHHVQYTDD
ALKACVNLSERYINDRFFPDKAIDVMDEVGSKVHLRNLKVPKEVEEKEKEIKEANAKKTTAVKNQNYELAANYRDKVCAL
EKELDELNAAWTKGEYKDIDIVTEKEVSETVSIMTGVPVERIAEAEGSRLKAMSDTLKKTVIAQDNAIDKVVKAIQRNRV
GLKDPNHPIGVFMFLGPTGIGKTHLAKKLAQIMFGSDDALIRIDMSEYSEGFNTSRLIGAPPGYVGYEEGGQLTEKVRRK
PYSIILLDEIEKAHGNVFNMLLQVLDEGRLTDGNGRIVDFRNTIIIMTSNAGTRQLKDFGRGVGFNAGGSFGSDINESDK
EYARGIIQKSLSKQFAPEFLNRLDEIVMFDQLDLDAILKITDIELASLTKRIEQIGYQIEISDKAKEFVAKKGYDVQFGA
RPLKRAIQTYIENGISELILSESIKLGDTISVGKVPNKEELSFK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 6e-163 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF0669_01552 YP_008470279.1 hypothetical protein VFG0080 Protein 2e-148 50
HMPREF0669_01552 YP_008470279.1 hypothetical protein VFG0079 Protein 8e-180 46