Gene Information

Name : O180_02570 (O180_02570)
Accession : YP_008469760.1
Strain : Chlamydia trachomatis J/31-98
Genome accession: NC_022121
Putative virulence/resistance : Virulence
Product : tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 543295 - 544455 bp
Length : 1161 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGTCGATAGAACACATTCTTATTATTGACGATGATCCCCATATCCTGGCTCTTCTTTCTGAGATACTGGGCGCTCGGAA
CTTTTCAGTGTCTTCTGCTCCAGGAGTCAAACAAGCTATTAAGCAGATCTCTAACTGTCCTTTCGATCTGATTATTTCCG
ATATGAATATGCCTGATGGTTCAGGATTGGATATTATCCAGTATACAAAACAGCATCGTCCGCAAACCCCTATCTTGGTC
ATTACTGCTTTCGGAACTATTCAAAATGCTGTTGAAGCTATGCGATTCGGAGCTTTTAACTATCTGACCAAACCGTTTTC
CCCCGATGCCCTTTTTACTTTAATCGCTAAAGCCGAAGAACTCCAAGCGCTACAACAAGACAACCTATTTCTACAATCAC
AAGGATCCTCCATCTCACATCCTCTGATCGCCGAAAGTCCTTCCATGAAACAGCTACTTGATAAAGCTCGCCGAGCGGCT
AACAGTTCTGCGAATATATTCGTACACGGAGAATCCGGATGCGGAAAAGAAAATCTTTCATTTTTTATCCACAAGCACTC
CCCTCGATCTACTAAGCCCTATATTAAAGTCAATTGTGCTGCTATCCCCGATACTTTGTTAGAATCTGAGTTTTTCGGGC
ACGAAAAAGGAGCTTTCACAGGAGCAACCACGAAGAAAGTAGGAAGATTTGAACTCGCCCACCAAGGCACTCTTTTACTA
GATGAAATCACAGAAATTCCGATCCATTTGCAAGCCAAACTTTTGCGGGCAATACAAGAACAAGAATTCGAACATATTGG
AGGAATAAAAACCCTCCCTGTAAACATTCGATTTCTAGCCACTTCCAATCGTGACCTTGAGGAAGCTATTGAAACCAAAG
TTCTCCGTCAAGATCTCTACTATCGATTGAGTGTGATCTCTTTACACATCCCTCCCCTTCGCGATAGAAAAGAAGATATC
CTCCCTTTAGCTCATTACTACTTAGAAAAATTTTGTAAGATGAATAATAAGCCTCCAAAAACATTGTCTTTAGAAGCGCA
AAGAAATCTTTTGGATTATTCATGGCCTGGGAATGTTCGAGAACTCTCTAACGTACTCGAACGAACTGTTATTCTAGAAA
ACGATCCTGCGATCACTCCTTCTATGCTCGCTCTCTTATAA

Protein sequence :
MSIEHILIIDDDPHILALLSEILGARNFSVSSAPGVKQAIKQISNCPFDLIISDMNMPDGSGLDIIQYTKQHRPQTPILV
ITAFGTIQNAVEAMRFGAFNYLTKPFSPDALFTLIAKAEELQALQQDNLFLQSQGSSISHPLIAESPSMKQLLDKARRAA
NSSANIFVHGESGCGKENLSFFIHKHSPRSTKPYIKVNCAAIPDTLLESEFFGHEKGAFTGATTKKVGRFELAHQGTLLL
DEITEIPIHLQAKLLRAIQEQEFEHIGGIKTLPVNIRFLATSNRDLEEAIETKVLRQDLYYRLSVISLHIPPLRDRKEDI
LPLAHYYLEKFCKMNNKPPKTLSLEAQRNLLDYSWPGNVRELSNVLERTVILENDPAITPSMLALL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 6e-61 42
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 6e-61 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O180_02570 YP_008469760.1 tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase VFG1249 Protein 4e-74 45
O180_02570 YP_008469760.1 tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase VFG1214 Protein 7e-75 44
O180_02570 YP_008469760.1 tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase VFG0116 Protein 1e-65 42