Gene Information

Name : B737_8926 (B737_8926)
Accession : YP_008465254.1
Strain : Amycolatopsis mediterranei RB
Genome accession: NC_022116
Putative virulence/resistance : Resistance
Product : polar amino acid ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 9922662 - 9923405 bp
Length : 744 bp
Strand : -
Note : -

DNA sequence : 
GTGACGACGACGGCGGTGCGCTCGTCCAGTGTGGAGCTGCGGGACATCCACGTCAGCTTCGGCACGCTCGAAGTCCTGCG
CGGAGTCGACCTCCGGGTCGAGAGCGGGAAGACGACGTGCGTCATCGGCCCGTCCGGCTCCGGCAAGTCGACGCTCCTGC
GCTGCGTGAACCGCTTGCAGGAGCCCGATTCCGGCGATCTGCTGCTCGACGGCGAATCGGTGATCAAGGCCGACCCGGAC
GCCCTGCGCCAGCGCGTCGGCATGGTGTTCCAGCACTTCAACCTCTTCGGCCACCGGAGCGTGCTGGACAACATCGTGCT
GCCGCTGCGCAGCGTGAAGAAGCTGAGCAAGGAGGAGGCGTCGGCGATCGCCCGGGCTCGCTTGGCGGACGTCGGCCTGG
CGGACAAGGCGCCGTACCGGCCCAGCGCGTTGTCCGGCGGCCAGCAGCAGCGCGTCGCGATCGCGCGGGCGCTGGCGATG
GACCCCGAGGTGATGCTCTTCGACGAGGCGACGAGCGCGCTGGACCCGGAGCTGGTCAAGGGCGTGCTGAACCTGATGGC
GGGCCTGGCTTCGCGGGGGCTGACGTTGATCGTGGTGACGCACGAGATGGGGTTCGCCCGCAGCGTGGCCGACGAGGTGG
CGTTCATGGACGCGGGCCGCATCGTCGAGCAGGGCCCACCGGCGGAGCTCTTCGACGAGCCGCAGAGCCCGCGCTTGCAG
CGGTTCCTCTCACAGGTGCTCTGA

Protein sequence : 
MTTTAVRSSSVELRDIHVSFGTLEVLRGVDLRVESGKTTCVIGPSGSGKSTLLRCVNRLQEPDSGDLLLDGESVIKADPD
ALRQRVGMVFQHFNLFGHRSVLDNIVLPLRSVKKLSKEEASAIARARLADVGLADKAPYRPSALSGGQQQRVAIARALAM
DPEVMLFDEATSALDPELVKGVLNLMAGLASRGLTLIVVTHEMGFARSVADEVAFMDAGRIVEQGPPAELFDEPQSPRLQ
RFLSQVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-25 42
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-30 41
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-30 41
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 3e-17 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B737_8926 YP_008465254.1 polar amino acid ABC transporter ATPase NC_008702.1.4606598. Protein 1e-25 42