Gene Information

Name : B737_4975 (B737_4975)
Accession : YP_008461307.1
Strain : Amycolatopsis mediterranei RB
Genome accession: NC_022116
Putative virulence/resistance : Virulence
Product : iron ABC transporter permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5582731 - 5583768 bp
Length : 1038 bp
Strand : +
Note : -

DNA sequence : 
GTGCGAACAGACCCCGGAGGGATCGCTCTCGAGCGACGCCCGCCACACACGGGCCGCGCGCTCGGTCTGCTGGCCGCTCT
CGGCGTCCTGGTTTTCCTCGGCCTGCTGAGTGTCTGGCTGGGCTCCAAGGAGATTGCGTTCGGCGCCGTCTGGCAGGTCC
TGTGGCACGACGACGGCTCCGCCGACGCCGTGATCATCCACAGTGTCCGGATCCCGCGGACCCTCCTGGCGGTGCTGGTC
GGCGCCGCGCTCGGCCTGGCCGGCACGCTCATGCAGGCGCTGACCCGCAACCCCCTGGCCGACCCGGGACTGCTCGGCGT
CAGCGCCGGGGCCGCGTTCGCCATCGTCTTCTCCATCACCGTGCTCGGCGTGAGCTCCCTCTACGGCTACATCTGGTTCG
CCTTCGCCGGCGCGCTCGCCGCGACCACGGTCGTCTACTTCCTCGGCACCCGGGGCCGCAGCGGCTCGAGCCCGGTCAAG
CTCGCCCTCGCCGGAGCCGCCGTCACGGCCCTGCTCGGCTCGTTCACCAGCGCGATGGTGCTCTCGGACCCGGTGGCGCT
CAACCGGTTCCGGTTCTGGTCGGCCGGTTCGCTCGCCGGTGTCGACAGCGGATCGCTGCTGCGGGTCCTGCCGTTCCTGC
TCGTCGGCGTGGTGCTGGCGATCGCGAGCGGACCCGCGTTGAACAGCCTCGCGCTCGGCGACGACGTCGCGGTCGCGCTC
GGGCGGCGGCTGGGCCCGCTGCGGCTGCGCGGCGCGCTGGCCATCACGCTCCTGACCGGCGCTTCCGTCGCGGTCGCCGG
CCCGATCGTGTTCCTCGGCCTGATCGTCCCGCACGCCGTGCGGTTCGTCATCGGCCCGGACCACCGGTGGCTGCTGCCCT
ACACCGCGGTGCTCGCGCCCTGCCTGCTGCTCGCCGCGGACATCCTCGGCCGGATCATGGCGCGGCCCGGCGAGGTCCGC
GCCGGCGTGATCGTCGCCTTCCTCGGCGCACCTTTCTTCATCTACCTGGTCCGCCGCCGCAAGCTGGTGGAAGCCTGA

Protein sequence : 
MRTDPGGIALERRPPHTGRALGLLAALGVLVFLGLLSVWLGSKEIAFGAVWQVLWHDDGSADAVIIHSVRIPRTLLAVLV
GAALGLAGTLMQALTRNPLADPGLLGVSAGAAFAIVFSITVLGVSSLYGYIWFAFAGALAATTVVYFLGTRGRSGSSPVK
LALAGAAVTALLGSFTSAMVLSDPVALNRFRFWSAGSLAGVDSGSLLRVLPFLLVGVVLAIASGPALNSLALGDDVAVAL
GRRLGPLRLRGALAITLLTGASVAVAGPIVFLGLIVPHAVRFVIGPDHRWLLPYTAVLAPCLLLAADILGRIMARPGEVR
AGVIVAFLGAPFFIYLVRRRKLVEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 1e-22 43
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 1e-22 43
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 1e-22 43
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 1e-22 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B737_4975 YP_008461307.1 iron ABC transporter permease VFG0926 Protein 2e-32 49