Gene Information

Name : B737_4602 (B737_4602)
Accession : YP_008460934.1
Strain : Amycolatopsis mediterranei RB
Genome accession: NC_022116
Putative virulence/resistance : Unknown
Product : dipeptide/oligopeptide/nickel ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5147567 - 5149312 bp
Length : 1746 bp
Strand : +
Note : -

DNA sequence :
GTGACCACCCCGCTGCTGCAGCTCACCGACCTGACCGTCACCTACGCGGTGGGGGACTCCGCCGTCCCCGCCGTCCGCGG
CGTCGGCCTCACCCTCGACCCCGGCGGCACCCTCGGCGTCGCCGGCGAGTCCGGCTCGGGCAAGTCCACCGTCGCGATGA
GCGTGCTGCGCCTCCTGCCGCGCACCGCCAAGATCACCGGCGAGATCCTCCTCGACGGCGAAGACGTCACCACCATGAAG
TGGGGACGGCTGCGCGCGGTCCGCTGGGCCGAGGCGTCGGTGGTGTTCCAGGGCGCCATGCACGCGCTCAACCCCGTCCG
CAGGATCGGCGAGCAGATCGCCGAACCGCTGCGGCTGCACCCGCCCGCGGGCAAGGCGCTCACCGACACCGAGGTCGAGG
CCCGCGTCGCCGAACTGCTCACCCAGGTCGACCTGCCCCCGAGCCGGGCCGGGGCCTACCCCCACGAGCTGTCCGGCGGG
CAGAAGCAGCGCGTCATGATCGCCATGGCGCTGGCCTGCTCACCCCGGCTGATCATCGCCGATGAGCCGACCACCGCCCT
CGACGTCATCGTCCAGGCCCAGGTCCTCGCCCTGCTCACCAAGCTGGTCGCCGAGCAGCACATCGGGCTGATCATGATCA
GCCACGACCTGTCCGTGCTCGCCGCCACCTGCCAACGCATCGCCGTCATGTACGACGGGCAGATCGTCGAAGAAGGCCCT
AGCGCCGAGGTGATGGGCTCGCCCCGCCACGACCACACCCGCGCCCTGGCCGCGGCGTTCCCGACCGTCGGCGACCCGGT
GTCCCGCTTCGCCCCGGCCACCAGCACCCCGCTGCCACCCGAACCGGCGGACCGCGCCCCCACCGGCGAGCCGCTGCTGG
CCGCCGAAAACCTGCGCGTGTCCTTCCGCGACCGCACCGGTAAGCGCATCGACGCCGTCGCCGGCGTCGACCTCACGGTG
TCCCGCGACGAGATCGTCGCCCTGGTCGGCCAGTCCGGCTCCGGCAAGACCACGCTCGCCCGCACCCTGCTGGGCCTGCA
GAAACCCGACTCCGGCGTGGTCCGCTACGCCGGGAAGCCCGTCCCGGCAGGCGGGGCCGGGCTCAAGGCCTACCGCCGTC
GGGTCCAGCTCGTCCTGCAGGACCCGACGAGTGCGCTCAACCCGGCCCACACCGTCTACGAGGCCGTCGCCGAGGGCCCC
CGGATCCACCAGCTCCCCGACGAGCGGGCCGTCGTCCACCGGGCCTTGGAAGCCGCCGAGCTGCGGCCCGCCGGGAAGTA
CGCCGACCGGCTCCCGCACCAGCTCTCCGGCGGCCAGCGCCAGCGCGTCGTCATCGCCGGGGCACTGGCGCTCGAACCGT
CGGTGGTGGTGGCCGACGAACCGGTCGCCTCCCTCGACGCGTCCGTCCGCGGCGAGATCCTCGGACTGCTGCTGCGGCTG
CGCCGCGAACTCGGCCTCGCCGCCCTGGTGATCACCCACGACCTCGGCCTGGCCTGGAACATCGCCGACCGCGTCGCCGT
GATGTACCGCGGCGAGCTCGTCGAAACCGGCACCGTCGAACAGGTCCTGCTCGATCCACAGCACGAGTACACGAAGTCCC
TGCTGGCCGCCCTGCCCGGCGGCACCCTCCAGCACCGCGACGCAGTGACTCCGGGGCTTCGCCCCGAGCCGGGGGCTCCG
CCACCCGGAGCCCCCGAAAGGACCTTGACTGATACTGCGGGAACTCCGCACGAGCGCGGTGTGTAA

Protein sequence :
MTTPLLQLTDLTVTYAVGDSAVPAVRGVGLTLDPGGTLGVAGESGSGKSTVAMSVLRLLPRTAKITGEILLDGEDVTTMK
WGRLRAVRWAEASVVFQGAMHALNPVRRIGEQIAEPLRLHPPAGKALTDTEVEARVAELLTQVDLPPSRAGAYPHELSGG
QKQRVMIAMALACSPRLIIADEPTTALDVIVQAQVLALLTKLVAEQHIGLIMISHDLSVLAATCQRIAVMYDGQIVEEGP
SAEVMGSPRHDHTRALAAAFPTVGDPVSRFAPATSTPLPPEPADRAPTGEPLLAAENLRVSFRDRTGKRIDAVAGVDLTV
SRDEIVALVGQSGSGKTTLARTLLGLQKPDSGVVRYAGKPVPAGGAGLKAYRRRVQLVLQDPTSALNPAHTVYEAVAEGP
RIHQLPDERAVVHRALEAAELRPAGKYADRLPHQLSGGQRQRVVIAGALALEPSVVVADEPVASLDASVRGEILGLLLRL
RRELGLAALVITHDLGLAWNIADRVAVMYRGELVETGTVEQVLLDPQHEYTKSLLAALPGGTLQHRDAVTPGLRPEPGAP
PPGAPERTLTDTAGTPHERGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 4e-70 41
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 4e-70 41
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 4e-70 41
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 4e-70 41