Gene Information

Name : kdpE (B737_1883)
Accession : YP_008458215.1
Strain : Amycolatopsis mediterranei RB
Genome accession: NC_022116
Putative virulence/resistance : Virulence
Product : two-component system response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2045272 - 2045970 bp
Length : 699 bp
Strand : +
Note : -

DNA sequence :
ATGAGCGACCCGGGCGCCACCGTGCTGGTGGTCGACGACGAACCGCAGATCGTGCGGGCACTGCGGATCAACCTGACCGC
CCGCGGCTACAAGGTGATCACCGCGCACGACGGCACGGCCGCGTTGAAAGCGGTGGCCGAGACCAAGCCCGACGTGGTGG
TTCTGGACCTCGGCCTGCCCGACCTCGACGGCACCGAAGTGATCGCGGGCCTGCGCGGCTGGACGACGGTCCCGATCATC
GTGCTCTCGGCGCGCGGCGACTCGGCCGACAAGGTCGAGGCCCTCGACGCGGGCGCCGACGACTACGTGACGAAGCCGTT
CGGCATGGACGAGCTGCTGGCGCGGCTGCGCGCGGCGGTCCGCCGTTCGGCGGTGGCGGGCGCGGACGACGCGGACGCGG
TGGTGGACACGGCGTCGTTCAGCGTGGACCTGGCGGCGAAGAAGGTCCGCCGCCACGACGGCGTGGAGGTGCACCTGACG
AAGACGGAGTGGGGCGTGCTGGAGCTGCTGGTCCGCAACCGCGGCCGGCTGGTGGCGCAGAAGCAGCTCCTGCACGAGGT
GTGGGGCCCGTCGTACGAGACGGAGTCGCACTACCTGCGGGTGTACCTGGCCCAGCTGCGGCGCAAGCTGGAACGGGAAC
CCTCCCGGCCCCGGCACCTGCTCACCGAACCGGGGATAGGTTACCGCTTCGAGGTCTGA

Protein sequence :
MSDPGATVLVVDDEPQIVRALRINLTARGYKVITAHDGTAALKAVAETKPDVVVLDLGLPDLDGTEVIAGLRGWTTVPII
VLSARGDSADKVEALDAGADDYVTKPFGMDELLARLRAAVRRSAVAGADDADAVVDTASFSVDLAAKKVRRHDGVEVHLT
KTEWGVLELLVRNRGRLVAQKQLLHEVWGPSYETESHYLRVYLAQLRRKLEREPSRPRHLLTEPGIGYRFEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 1e-26 41
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 9e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
kdpE YP_008458215.1 two-component system response regulator VFG1390 Protein 6e-24 42