|
Name : kdpB (B737_1880) Accession : YP_008458212.1 Strain : Amycolatopsis mediterranei RB Genome accession: NC_022116 Putative virulence/resistance : Unknown Product : K+-transporting ATPase ATPase B chain Function : - COG functional category : - COG ID : - EC number : - Position : 2040091 - 2042136 bp Length : 2046 bp Strand : + Note : - DNA sequence : ATGACCGTCACCGAAGAACGACCGCAGGTGACCCCCGCCGAACCACCCGGACGCGTCGGCGCCGGGGTCTTCAGCCCCCG CCAGCTCTGGACGTCGCTGCCGGAAGCCCTGCGGAAGCTGAACCCGAAGCACCAGCTCGGCAACCCGGTGATGTTCGTGG TGTGGGTGGGCTCCGCGCTCACCACCGTCTTCGCGGTCACCGAGCCGAGCGTGTTCACCATCCTGATCGCCGTCTGGCTG TGGTTCACGGTCCTGTTCGCCAACCTCGCCGAGGCTGTCGCGGAAGGGCGGGGCAAGGCCCAAGCCGAGAGCCTGCGGCG GTCCAAGAAGGAGACCGTCGCCCGCCGGCTCACCGAAACCGGAGAGGAGCAGGTCCCGGGGGTCGAGCTGAAGATCGGCG ACCGGGTCGTCGTCGAGGCGGGCCAGGTGATCCCGGGTGACGGCGACGTCGTCGAAGGCATCGCGACCGTCGACGAATCG GCCATCACCGGCGAGTCGGCCCCGGTCATCCGCGAGTCCGGCGGCGACCGCAGCGCCGTCACCGGCGGCACGACCGTGCT GAGCGACCGGATCGTCGTGCGGATCACCACCAAACCCGGCGAGTCCTTCGTGGACCGCATGATCGCGTTGGTGGAGGGCG CTTCCCGGCAGAAGACGCCGAACGAGATCGCGTTGACGATCCTGCTCTCGACGCTCACGATCATCTTCCTGCTCGCCGTC GTCGCGCTCCAGCCGATGGCCCGCTACTCCGGGTCCGAGCAGTCCGTGATCGTGCTGACCGCGCTGCTCGTGTGCCTCAT CCCGACGACGATCGGCGCGCTGCTGAGCGCGATCGGCATCGCCGGGATGGACCGCCTGGTGCAGCGCAACGTCCTGGCGA CCAGCGGCCGCGCGGTGGAGGCCGCGGGCGACGTCTCGACGCTGCTGCTCGACAAGACCGGCACCATCACCTTCGGCAAC CGCCGTGCGACCGAGCTGCTTCCGGTCGGAACGTCCACGATGGACGAGCTGGCCCGCGCCGCCCGGCTCGCCAGCCTGGC CGACGAGACCCCCGAAGGCCGCAGTGTCGTCGAGCTGACGTCGGACCACGCGGGGCAGGACGAGCACGGCGAGTTCGTCC CCTTCACCGCGCAGACCCGGATGAGCGGCATCGACATCGGAACCCGGCGGATCCGCAAGGGGGCGGCGAGTGCCGTCCGT GCCTGGGTGCGCGAGAACGGCGGCGAGTTCCCCGGCGAGACCGAGCGGGTGGTCGACGAGATCAGCGCCCAGGGCGGCAC CCCGCTGGTGGTCGCCGAGGACACCGTGGTGCGTGGCGTGATCCGGTTGTCCGACGTCGTCAAGCCGGGCATGAAGGAAC GCTTCGCGGAGCTGCGCGAGATGGGCATCAAGACGGTGATGATCACCGGCGACAACCCGCTCACCGCGAAGGCCATCGCC GCGGACGCCGGCGTCGACGACTACCTCGCCGAGGCCAAGCCCGAAGACAAGATGGCGCTCATCAAGCAGGAGCAGGAAGG CGGCCGGCTCGTCGCGATGACCGGCGACGGCACCAACGACGCTCCCGCCCTCGCGCAGGCCGACGTCGGTGTGGCGATGA ACACCGGCACCTCGGCCGCCAAGGAGGCCGGGAACATGGTCGACCTCGACAGCGACCCCACGAAGCTGATCGAGATCGTC GGGATCGGCAAGCAGCTGCTGATCACCCGCGGCGCGCTGACCACCTTCAGCGTCGCCAACGACCTGGCCAAGTACTTCGC GATCCTGCCTGCGATGTTCACCGGTATCTACGCCCAGCTCGGCGGGCTGAACGTCATGCACCTGGCCACGCCGAAGTCGG CGATCCTGTCGGCGGTCATCTTCAACGCCCTGATCATCGTCGTGCTCATCCCGCTGGCCCTGCGCGGCGTGCGGTACAAG CCGTCGTCGGCCTCGGCTCTGCTGCGCCGCAACCTGCTCGTCTACGGCCTCGGCGGGATCGTCGGCCCCTTCCTCGGGAT CTGGCTGATCGACCTGCTCGTGCGCCTCATCCCCGGAATCGGGTGA Protein sequence : MTVTEERPQVTPAEPPGRVGAGVFSPRQLWTSLPEALRKLNPKHQLGNPVMFVVWVGSALTTVFAVTEPSVFTILIAVWL WFTVLFANLAEAVAEGRGKAQAESLRRSKKETVARRLTETGEEQVPGVELKIGDRVVVEAGQVIPGDGDVVEGIATVDES AITGESAPVIRESGGDRSAVTGGTTVLSDRIVVRITTKPGESFVDRMIALVEGASRQKTPNEIALTILLSTLTIIFLLAV VALQPMARYSGSEQSVIVLTALLVCLIPTTIGALLSAIGIAGMDRLVQRNVLATSGRAVEAAGDVSTLLLDKTGTITFGN RRATELLPVGTSTMDELARAARLASLADETPEGRSVVELTSDHAGQDEHGEFVPFTAQTRMSGIDIGTRRIRKGAASAVR AWVRENGGEFPGETERVVDEISAQGGTPLVVAEDTVVRGVIRLSDVVKPGMKERFAELREMGIKTVMITGDNPLTAKAIA ADAGVDDYLAEAKPEDKMALIKQEQEGGRLVAMTGDGTNDAPALAQADVGVAMNTGTSAAKEAGNMVDLDSDPTKLIEIV GIGKQLLITRGALTTFSVANDLAKYFAILPAMFTGIYAQLGGLNVMHLATPKSAILSAVIFNALIIVVLIPLALRGVRYK PSSASALLRRNLLVYGLGGIVGPFLGIWLIDLLVRLIPGIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 4e-163 | 60 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 3e-163 | 60 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 3e-152 | 57 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 3e-153 | 57 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 2e-152 | 57 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 3e-152 | 57 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 3e-152 | 57 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 3e-152 | 57 |
