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Name : lysS1 (O5Y_00370) Accession : YP_008450681.1 Strain : Rhodococcus erythropolis CCM2595 Genome accession: NC_022115 Putative virulence/resistance : Unknown Product : lysyl-tRNA ligase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 90030 - 93386 bp Length : 3357 bp Strand : - Note : COG2898 Uncharacterized conserved protein DNA sequence : ATGGCACCATTGACCGAGGTATCGGACACCACTGCAGAGCTGGTGGAATCGCCACCCGAAAATCCGCGCCAGGCGCGGCG ATTCCGCAAAGGGCGGTTCAGCCAGGTTCCCCATATCTCGGGATTGATCCTCGGAGTCTTCTCCGTACTGGTGTTCCTGT GGAGCATCTCGCCGGTTCTGCGGCACATCCTCCGCGTCCCACGCGAATACATCGACAGCTACTACTTCGACGCACCGGAT ACGAGCCTGTCGTGGGCGCTCGTCGTCGCCCTGCTCGCCGCGGCCCTCGCGAGTCGCAAGCGCATCGCCTGGTGGCTGCT GACGATCTACCTCGCGCTGATCACCCTCACCAACATCGCCTCCACGATCGTCGACAAGAACCCGAACAACGCCGTCGCCG CTGTCGTTTTGCTTGTCGTGATCGGAATCCTCATCGCCGCGAGGCCCGAGTTCTACACACGCGTACGACGCGGCGCCGGC TGGAAAGCGCTCGGCGTACTGATCGGCGGCATGGCTGTCGCGACCGTGATCGGTTGGGGCCTTGTCGAACTCTTCCCGGG CGACCTGCCGCAGAACCAGCGATTCCTCTGGGCCCTGAACCGCGTCACCGCGGCGGCTTCGGTCGACAACGAGGTGTTCG ACGGCCATCCACGCGTCTTCGTCAACACGGTCCTCGGTCTCCTCGGCGCCATCGCACTACTCGCCGCCGTTATGACGCTC TTCCGCGCGCAACGCTCCAACAACGCCCTCACCGGCAACGACGAGTCCGCGATCCGCGGGTTGATCCAGAACTTCGGCGC CGACGACTCCCTCGCCTACTTCGCCACCCGCCGCGACAAGGCCGTCATCTTCGCGCCGAGCGGCAAGGCCGCGATCACCT ACCGCGTCGAAATCGGCGTCTGCCTCGCCAGTGGTGATCCCATCGGCGATCCCGAAGCGTGGCCGCACGCCATCGAAGCG TGGCAGGTCCTGGCCTCGCAGTACGGCTGGGCGACGGCCGTTATGGGCGCCAGCGAAACCGGGGCGACGGCGTACAAGAA GGCAGGCTTGAGCGTCCTGCAACTCGGCGACGAAGCGATCCTGCGCACCCGCGAGTTCAACCTCAACGGACGCGACATGC GCCCGGTGCGCCAGGCCGTCACCCGCGTCAGGCGCCACGGCGTCACCGTGCGGATGCGACGCCATCGCGACATCCCGCCC GAGGACATGGCGGCCGTCATCATCCGCGCGGACGACTGGCGTGACACCGACACCGAGCGCGGCTTCTCCATGGCGCTCGG CCGACTGGGCGATCACCTCGACGGCGACTGCCTCCTCGTCGAAGCCGTCATGGGCGAAGGCACGGAGGACGAAAGCGTCG TCGGCATGCTTTCGCTCGTGCCGTGGGGACCGAACGGCGTTTCGCTCGACCTGATGCGTCGCAAGCCGACGGCACCCAAC GGTGTCGTCGAATTGATGGTCTCGGAGTTGGCCACACGTTCCGACGAGATCGGCGTCGTGCGGGTCTCGCTCAACTTCGC CGTCTTCCGCTCGGTGTTCGAGGAAGGTTCGCGCATCGGCGCCGGCCCTATCCTCCGTATCTGGCGCTCGGTGCTCGTCT TCTTCTCCCGCTGGTGGCAGCTCGAAGCGCTGTACCGCTCCAACGTGAAGTACCAGCCGGATTGGGAGCCGCGCTTTCTC TGCTTCGAGGACAACCGTGAGCTTCCACGCGTCGGATTCGCGTCGGCCATCGCCGAAGGCTTTGTGGTGCTGCCCAGTTT CGGCCGCAAGTCGAGCCAGGTCGTCAAGCACACCGGAACACATGCGGCGGTGCCGGCAGCTCTGGTGACTTCCGAAGGAC TGCACGCCGACGGCAGCCCGCCGGACTCGGCGCCGTCGTTCACGACCAACGGTCCGCGTCGACCCGAGCAGGTCCGCGTG CGCATGAACAAACTCGCGCAACTGGCCGACGAAGGAATCGCCGCCTACCCCGTCGCCTACCCGCCGACGCATACGATCGC AGCCGCAGCGAAGTCGCCGGAGGGCACCCGCGTACGCATCGCGGGACGCCTGCTGAGGGTTCGCGACTACGGCGGAGTCG TGTTCACGGACGTGCGCGACTGGTCCGGCGACATCCAGGTTCTGGTCGACCAGGACAACGTCGGCCGCGAGAAGTTGGCG GAGTTCGCTGCCGAGTTCGATCTCGGTGACCTGATCGAAGTGAGCGGAACCATCGGGCGCAGCCGCAAGGGCGAGCTGTC GCTCATCGCCGTCGAGTGGCGCATGAACGGCAAGTGTCTGCACCCGCTGCCGGACAAGTGGAAGGGCCTCTCGGATCCCG AGACCCGAGTCCGCCAGCGGTACCTCGACATCGCCCTCAACCCGAAGGCCCGCGAACTGCTCGAGGCCCGAAGCGCCGTC GTGAAGTCGCTGCGCGATTCACTCGGTGGTCGCGGATACCTCGAAGTCGAGACCCCGATCCTGCAGCAGGTGCACGGCGG CGCGAACGCCGCTCCGTTCCTGACACACATCAACGCGTACAACCTCGACCTCTATCTCCGCATCGCACCCGAGCTGTACC TGAAGCGGTTGTGCGTCGCGGGTATGGAGAAGGTGTTCGAGATCGGCCGCGTGTTCCGTAACGAGGGCGTCGACTTCAAA CACAATCCCGAGTTCACGATCCTCGAGGCCTACGAGGCGCACAGCGACTACGAGGGCATGATGCGGATGTGCCGCGAGCT CATCCAGGCGGCGGCCGTCGCAGCGTTCGGGCGCGAAATCATCATGCGACCCGGCCCGGACGGCGAATTGGTCGAGGTCG ACATCTCCGGCGAGTGGCCGGTGAAGACGATGCACGGCGCCGTCGCCGAAAAGCTTGGTGTCGACGTCTCCCCCGAGACG AGTCTCGAAGACCTGCAGAAGCTGTGCGACGCCAACGAGATCCCGTACCAGTCCAGCTGGGATACCGGCGCCATCGCGCA GGAGATGTACGAGCACCTGGTCGAGGACTACACGGAGTTCCCGACGTTCTACACCAACTTCCCCACCTCGATGTCTCCGC TCACCCGGCCGCATCGCAGCATCCCCGGCGTTGCCGAGAAGTGGGACCTCGTCGCATGGGGTGTCGAACTGGGAACCGCG TACAGCGAGTTGACCGACCCCGTGGATCAGCGCAACCGGCTCACCGAGCAGTCGATGCTTGCGGCCGGCGGTGATCCAGA AGCAATGGAATTGGACGAGGACTTCCTTCAAGCCCTCGAACACGCGATGCCGCCGACGGGTGGTCTCGGGATGGGCGTCG ACCGAATCGTCATGCTGATCACGGGCGGCAGCATCCGCGAGACGCTGGCCTTCCCCCTCGCGAAACCGCGTCAGTAG Protein sequence : MAPLTEVSDTTAELVESPPENPRQARRFRKGRFSQVPHISGLILGVFSVLVFLWSISPVLRHILRVPREYIDSYYFDAPD TSLSWALVVALLAAALASRKRIAWWLLTIYLALITLTNIASTIVDKNPNNAVAAVVLLVVIGILIAARPEFYTRVRRGAG WKALGVLIGGMAVATVIGWGLVELFPGDLPQNQRFLWALNRVTAAASVDNEVFDGHPRVFVNTVLGLLGAIALLAAVMTL FRAQRSNNALTGNDESAIRGLIQNFGADDSLAYFATRRDKAVIFAPSGKAAITYRVEIGVCLASGDPIGDPEAWPHAIEA WQVLASQYGWATAVMGASETGATAYKKAGLSVLQLGDEAILRTREFNLNGRDMRPVRQAVTRVRRHGVTVRMRRHRDIPP EDMAAVIIRADDWRDTDTERGFSMALGRLGDHLDGDCLLVEAVMGEGTEDESVVGMLSLVPWGPNGVSLDLMRRKPTAPN GVVELMVSELATRSDEIGVVRVSLNFAVFRSVFEEGSRIGAGPILRIWRSVLVFFSRWWQLEALYRSNVKYQPDWEPRFL CFEDNRELPRVGFASAIAEGFVVLPSFGRKSSQVVKHTGTHAAVPAALVTSEGLHADGSPPDSAPSFTTNGPRRPEQVRV RMNKLAQLADEGIAAYPVAYPPTHTIAAAAKSPEGTRVRIAGRLLRVRDYGGVVFTDVRDWSGDIQVLVDQDNVGREKLA EFAAEFDLGDLIEVSGTIGRSRKGELSLIAVEWRMNGKCLHPLPDKWKGLSDPETRVRQRYLDIALNPKARELLEARSAV VKSLRDSLGGRGYLEVETPILQQVHGGANAAPFLTHINAYNLDLYLRIAPELYLKRLCVAGMEKVFEIGRVFRNEGVDFK HNPEFTILEAYEAHSDYEGMMRMCRELIQAAAVAAFGREIIMRPGPDGELVEVDISGEWPVKTMHGAVAEKLGVDVSPET SLEDLQKLCDANEIPYQSSWDTGAIAQEMYEHLVEDYTEFPTFYTNFPTSMSPLTRPHRSIPGVAEKWDLVAWGVELGTA YSELTDPVDQRNRLTEQSMLAAGGDPEAMELDEDFLQALEHAMPPTGGLGMGVDRIVMLITGGSIRETLAFPLAKPRQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lysS1 | YP_005682181.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 2e-161 | 42 |
| lysS1 | YP_005684273.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 7e-162 | 42 |
| lysX | YP_003784331.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 7e-162 | 42 |
| lysS1 | YP_005686365.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 7e-162 | 42 |
