Gene Information

Name : O5Y_03540 (O5Y_03540)
Accession : YP_008451304.1
Strain : Rhodococcus erythropolis CCM2595
Genome accession: NC_022115
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 769299 - 769991 bp
Length : 693 bp
Strand : +
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGAACAACGCACAAGCACCCGCAGTCCTGTCGGTCCACGCGCTGGGCAAGTCGTACGGCGAAGTTCCGGTGCTCCGAGG
TGTATCGCTGGAAGTGCGCGCCGGTACTGCTACGGCCATCATGGGTCCTTCAGGATCGGGGAAGTCGACACTGCTGCATT
GCATGTCAGGAATCGTCAAGCCCGACTCGGGAGCAATCTTACTTAGCGGCAGGCATATCGAGAACCTCGGTGAGAACGAC
CGCAGTCGGCTCCGACGAGAATCCTACGGGTTCGTTTTTCAATCGGGCCAACTGTTGCCGGAGCTTCCGGCGATCGAGAA
TGTCGCGCTGCCTCTCGTACTCAACGGGTTGTCCATCGCAGAAGCCAAGCGGACGGCACACGGCTTCTTCGCGCCCTTGG
GGCTGGATGGGCTGCAGGATCGTCGCCCGGGTCAGATGTCGGGTGGGCAGTCGCAACGTGTCGCGATTGCGCGAGCGTTG
GTGACCAAACCCGCCGTTCTCTTCGCGGACGAGCCGACCGGTGCCCTCGACGCGCAGACGAGTTGGGAAGTGATGAGGGT
GTTGCGTGATTCGGCTCAACAGATCGGTTCTGCGTTGGTCGTCGTCACTCACGATGCCGAAGTCGCTCGGTGGTGTGATC
GCACGATGATGATGCAGGCCGGTTCGCTCGTCGGGACACAGGTGGCGGCATGA

Protein sequence : 
MNNAQAPAVLSVHALGKSYGEVPVLRGVSLEVRAGTATAIMGPSGSGKSTLLHCMSGIVKPDSGAILLSGRHIENLGEND
RSRLRRESYGFVFQSGQLLPELPAIENVALPLVLNGLSIAEAKRTAHGFFAPLGLDGLQDRRPGQMSGGQSQRVAIARAL
VTKPAVLFADEPTGALDAQTSWEVMRVLRDSAQQIGSALVVVTHDAEVARWCDRTMMMQAGSLVGTQVAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-36 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-37 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-37 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-37 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O5Y_03540 YP_008451304.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-38 46
O5Y_03540 YP_008451304.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-38 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O5Y_03540 YP_008451304.1 ABC transporter ATP-binding protein VFG2059 Protein 9e-20 41