Gene Information

Name : O5Y_28645 (O5Y_28645)
Accession : YP_008456267.1
Strain : Rhodococcus erythropolis CCM2595
Genome accession: NC_022115
Putative virulence/resistance : Virulence
Product : manganese ABC transporter manganese-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6212332 - 6213258 bp
Length : 927 bp
Strand : -
Note : COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin

DNA sequence : 
ATGACGACTCGCGACGCGAAGAACTTCCGCCGCCTGGGAATTGCCGCCCTCGCCGCCCTGCTTCTCTCCAGCTGTTCTGC
GGTGAATTCCGGCTCCGACGACGACCGCCCGGTGGTGCTCACCACGTTCACCGTGCTGTCGGACATCGCCCAGAACGTTG
CCGGCGATCACCTTCGCGTCGAGTCGATCACCAAGGCGGGGGCGGAAATTCACGGCTACGAGCCGACGCCCGGAGACATT
CGGCGGGCGAGCGAAGCCGATCTGATCCTCGACAACGGCATGAACCTCGAGGCGTGGTTCGCGAAATTCGTCAACGGTCT
GGACGTGCCACACGTCGTGGTCAGCGACGGCGTCGAAGGCATTCCGATCGCCGGTGACGCGTATGCGGGCAAGCCCAATC
CGCATGCATGGATGTCTCCGTTGAATACGCAGATTTACGTCGACAACATGGTGACTGCTTTCAGTGACCTCGACCCGGAC
AACGCCTCGGCATTTGCGGGGAACGGCGCGAAGTACAAGGCGGAACTGCAAGCAGTTCAGGACGGCCTGGTCAGTGGGCT
GGCGGTATTGCCCGCAGGTCAGCGCGCACTCGTCAGTTGCGAGGGTGCGTTCTCCTATCTGGCCAGGGACGCGGGACTCA
GCGAGGCCTACATCTGGCCGGTCAATGCCGAGCAGCAGGCGACGCCGCAGCAGATCATCGCCGCGATCGACTTCGTCCGG
GCCAATTCCGTTCCCGCCGTCTTCTGTGAGTCGACGGTCTCGGATGCCCCCATGCAGCAGGTTGTCGGGGCGACCGGTGC
GAAATTCGGAGGGACGCTGTACGTCGACTCGCTGTCCGAAGCCGACGGTCCCGTGCCCACCTACCTGGACATGATTCGCC
ACGACACCGACGTCATCCTCGGCGGTCTGACCGGCGGTAAATCATGA

Protein sequence : 
MTTRDAKNFRRLGIAALAALLLSSCSAVNSGSDDDRPVVLTTFTVLSDIAQNVAGDHLRVESITKAGAEIHGYEPTPGDI
RRASEADLILDNGMNLEAWFAKFVNGLDVPHVVVSDGVEGIPIAGDAYAGKPNPHAWMSPLNTQIYVDNMVTAFSDLDPD
NASAFAGNGAKYKAELQAVQDGLVSGLAVLPAGQRALVSCEGAFSYLARDAGLSEAYIWPVNAEQQATPQQIIAAIDFVR
ANSVPAVFCESTVSDAPMQQVVGATGAKFGGTLYVDSLSEADGPVPTYLDMIRHDTDVILGGLTGGKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 6e-67 57
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 6e-67 57
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 5e-67 57
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 6e-67 57
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 6e-67 57

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O5Y_28645 YP_008456267.1 manganese ABC transporter manganese-binding protein BAC0349 Protein 3e-67 57
O5Y_28645 YP_008456267.1 manganese ABC transporter manganese-binding protein BAC0439 Protein 2e-60 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O5Y_28645 YP_008456267.1 manganese ABC transporter manganese-binding protein VFG0525 Protein 3e-67 57