Gene Information

Name : O5Y_28640 (O5Y_28640)
Accession : YP_008456266.1
Strain : Rhodococcus erythropolis CCM2595
Genome accession: NC_022115
Putative virulence/resistance : Virulence
Product : manganese ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6211604 - 6212335 bp
Length : 732 bp
Strand : -
Note : COG1121 ABC-type Mn/Zn transport systems, ATPase component

DNA sequence : 
ATGAACGAAGCCATTCGCGTCGAAAACGTCAGCGTTCACTACGGCGAGGTCCACGCACTGGACCATGTCGATCTGACGTT
GAATTCCGGAAGCGTCTGCGGACTGATCGGTATGAACGGTTCAGGAAAGTCGACCTTGTTCAAGGTGATCATGGGAATGA
TCAAGCCGGACAACGGCTCTGTGAGAATCGCCGGTCTCGACGCAGCCGCTGCGCGCAAGAGCGGGCGCGTCGGATACGTG
CCGCAGAGTGAAGACGTCGACTGGACCTTCCCGATCAGTGTCCGTGACGTCGTGATGATGGGTAGGTACGGCCACCTCGG
GTTCTTGCGACGTCCGCGGCGTGCAGATCGCGAGGCGGTGGCAGAGGCCCTCGAGCGGGTAGAGCTCACAGAATTTGCGG
ATCGTCAGATCGGTCAGCTCTCGGGTGGTCAGAAGAAGCGCGCCTTCGTCGCACGCGGTATCGCACAGGACGCGTCGATA
CTCTTGCTGGACGAGCCGTTTGCCGGCGTCGACAAGCGTTCCGAGGCAACGATTTCGACGCTGCTACGAGAGTTGGCTTC
CGACGGCCGATCGATCTTGGTCTCGACTCACGACCTCCACGCCGTGCCGAAACTCTGCGACGAGGCGGTACTGCTCATGC
GCAAGGTCCTGGTGCACGCCGACCCGGACACCGTGCTTCAACCGGAAAACCTCGCCCTGGCTTTCGGTCTCGACGTGATG
GACAGGACCTGA

Protein sequence : 
MNEAIRVENVSVHYGEVHALDHVDLTLNSGSVCGLIGMNGSGKSTLFKVIMGMIKPDNGSVRIAGLDAAAARKSGRVGYV
PQSEDVDWTFPISVRDVVMMGRYGHLGFLRRPRRADREAVAEALERVELTEFADRQIGQLSGGQKKRAFVARGIAQDASI
LLLDEPFAGVDKRSEATISTLLRELASDGRSILVSTHDLHAVPKLCDEAVLLMRKVLVHADPDTVLQPENLALAFGLDVM
DRT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 2e-49 51
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 2e-49 51
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 9e-49 50
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 1e-48 50
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 7e-49 50

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O5Y_28640 YP_008456266.1 manganese ABC transporter ATP-binding protein BAC0440 Protein 4e-52 51
O5Y_28640 YP_008456266.1 manganese ABC transporter ATP-binding protein BAC0350 Protein 5e-49 50
O5Y_28640 YP_008456266.1 manganese ABC transporter ATP-binding protein BAC0400 Protein 1e-37 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O5Y_28640 YP_008456266.1 manganese ABC transporter ATP-binding protein VFG0526 Protein 5e-49 50