Gene Information

Name : O5Y_27965 (O5Y_27965)
Accession : YP_008456131.1
Strain : Rhodococcus erythropolis CCM2595
Genome accession: NC_022115
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6058899 - 6061532 bp
Length : 2634 bp
Strand : +
Note : COG0542 ATPases with chaperone activity, ATP-binding subunit

DNA sequence :
ATGGACACCGGCAGCTTGACCGAAAAGTCACGAGAAGCCTTGCAGGAAGCCCAGAATGTTGCGACCAGAATGGGCCACAC
CGAAGTCGACGGAGAGCACCTGCTGCTCGCATTGGTCGATCAGCAGGATGGGCTGGTGCCCCGACTGCTCGAACAGGCCG
GCGCGAATGTCGAAGCACTTCGATCCGATCTGGATCGTGAACTGTCGCGTAGGCCGAAGGTCAGCGGCCCCGGCGTGACC
CCCGGTCAGGTGATGATCACCCAGCGTCTGGCCAAGCTGCTCGATGCCGCAGAGCGGGAGGCGAAGAGACTCAAGGATTC
CTACGTGTCGGTGGAGCATCTTGTGATGGCCCTTTCCGAGGAAGGATCGGCCAGCGCGGCCGGGCGGGTCCTCGCCAGTC
ACGGGGTCACACGGGACGCCTTCCTCACAGCGCTGACGAAGGTGCGCGGCAATCAGCGTGTCACGTCGGCAACCCCGGAG
GGGGCGTACGAGGCATTGGAGAAGTACGGGCGCGACCTCGTCTCCGAGGGGCGGGCAGGCAAACTCGATCCGGTCATCGG
CCGGGATGCCGAGATACGCAGGGTAACTCAGATCTTGAGCCGGAAAACGAAGAACAACCCGGTGCTGATCGGCGACCCCG
GTGTTGGTAAGACTGCGATTGTCGAGGGTCTCGCCCAGCGGATCGTCCGCGGCGACGTGCCCGAGGGCCTACGCGACAAG
ACGATCTTCTCGCTCGACATGGGTTCTCTGGTGGCCGGTGCGAAGTACCGCGGCGAGTTCGAGGAGCGACTGCAGGCCGT
GCTGTCCGAGGTGAAGGCTGCCGAGGGGCGCATCCTGTTGTTCGTCGACGAGTTGCATACCGTGGTCGGAGCGGGCTCGG
TCGGCGGCGAGGGGTCTCTCGACGCCGGCAACATGCTCAAACCGATGCTCGCACGCGGCGAACTGCACATGATCGGTGCC
ACCACTCTCGACGAGTATCGCAAGCACATCGAATCCGATGCGGCACTGGAGCGTCGATTCCAGACCGTTCTCGTCGACGA
GCCCAGTGCCGAGGATGCGATCTCGATTCTGCGCGGACTTCGAGAACGCCTCGAGGTGTTCCATGGCGTGAAAATTCAAG
ACGGTGCATTGGTGGCCGCCGTGACCCTCTCGCACCGGTACATCACCGACCGCTTCCTTCCGGACAAGGCGATCGATCTC
GTAGACGAGGCATGCGCTCGGCTCCGCACCGAAATCGATTCGATGCCTGCCGAACTCGACGAGCTCACCCGGAAGGTGAC
CCGTCTGGAGATCGAAGAGGCCGCACTGTCCAAGGAAACGGACGCGGCCAGCAAGGCGCGCCTCGAAGAATTGCGCAAGG
AGCTGGCCGACCTGCGGGCCGAGGCAGACGCCCGGCACGCTCAATGGGAGGCGGAGCGGCAGGCGATCCGGCGGGTGCAA
GAACTGCGAGGAGATTTGGAACGGTTGCGCGTCGAGGCCGAGGCCGCCGAACGCAACTACGACCTCAATCGGGCAGCCGA
GTTGCGATACGGCGAGATCACCGAGCTCGAACGCCGGCTCGAGGCGGCGGAGGAGCAACTGGCCACCAGACAAGGCCGAA
ATCCGTTGCTGCGTGAAGTGGTCACCGAAGACGAGATCGCAGAGATCGTGGCCGCATGGACGGGTATCCCGGTCGCCCGG
CTGCAAGAAGGTGAGCGGGAGAAGTTGTTGAAGCTCGACGAGATCCTGCACGAGCGGGTCGTCGGTCAGGACGAGGCGGT
GCAACTGGTCGCGGACGCTGTGATCCGGGCGAGGTCCGGTATCCGTGATCCTCGTCGACCGATCGGTTCGTTCATTTTCC
TGGGCCCGACGGGCGTCGGAAAGACCGAGCTTGCAAAGACATTGGCCAGCGCCCTATTCGACAGTGAAGACAACATGGTG
CGCCTCGATATGAGCGAGTACCAGGAACGGCACACGGTGAGTCGGCTCATCGGTGCACCTCCCGGATACGTCGGGTACGA
CGAAGGTGGCCAGCTCACCGAGGCGGTGCGGCGTAAGCCGTACTCCGTGGTGCTCTTCGACGAGATCGAGAAGGCCCACG
CCGACGTCTTCAATACCCTGCTGCAGGTGCTCGACGACGGCCGGATCACCGATTCTCAAGGGAGGCAAGTCGATTTCCGG
AACACGGTGATCATCATGACCTCCAACATCGGATCCCAGCATCTCCTCGACGGGGTCACAGCCGACGGCGAAATCAAGCC
GGACGCCAGGGAACGGGTGATGGCAGAACTGCGCGGGCATTTCCGCCCCGAATTCCTCAACCGGGTCGACGACATCGTGC
TGTTCTCCCCACTCACCCTGCCCCAGATCGAGTACATAGTGGAACTGCAACTCACCGACCTTCGAAACAGGTTGTCGGAG
AGACAGATACACCTGGAAATCACGCCGGAGGCACGCCGACTGATCGCCGAACACGGGTTCGACCCTGTCTACGGTGCGCG
GCCGCTGCGCCGATACATCGCACACGAGGTCGAAACCAAGATCGGCCGTGCACTGTTGCGCGGCGAGATCAAACCGGACG
GCACCATCAGCGTCACGGTGGACGGCGGCGAGCTTGCCGTCGCGTATGCCGAACCCGCCTTCGCGGCGGCCTGA

Protein sequence :
MDTGSLTEKSREALQEAQNVATRMGHTEVDGEHLLLALVDQQDGLVPRLLEQAGANVEALRSDLDRELSRRPKVSGPGVT
PGQVMITQRLAKLLDAAEREAKRLKDSYVSVEHLVMALSEEGSASAAGRVLASHGVTRDAFLTALTKVRGNQRVTSATPE
GAYEALEKYGRDLVSEGRAGKLDPVIGRDAEIRRVTQILSRKTKNNPVLIGDPGVGKTAIVEGLAQRIVRGDVPEGLRDK
TIFSLDMGSLVAGAKYRGEFEERLQAVLSEVKAAEGRILLFVDELHTVVGAGSVGGEGSLDAGNMLKPMLARGELHMIGA
TTLDEYRKHIESDAALERRFQTVLVDEPSAEDAISILRGLRERLEVFHGVKIQDGALVAAVTLSHRYITDRFLPDKAIDL
VDEACARLRTEIDSMPAELDELTRKVTRLEIEEAALSKETDAASKARLEELRKELADLRAEADARHAQWEAERQAIRRVQ
ELRGDLERLRVEAEAAERNYDLNRAAELRYGEITELERRLEAAEEQLATRQGRNPLLREVVTEDEIAEIVAAWTGIPVAR
LQEGEREKLLKLDEILHERVVGQDEAVQLVADAVIRARSGIRDPRRPIGSFIFLGPTGVGKTELAKTLASALFDSEDNMV
RLDMSEYQERHTVSRLIGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHADVFNTLLQVLDDGRITDSQGRQVDFR
NTVIIMTSNIGSQHLLDGVTADGEIKPDARERVMAELRGHFRPEFLNRVDDIVLFSPLTLPQIEYIVELQLTDLRNRLSE
RQIHLEITPEARRLIAEHGFDPVYGARPLRRYIAHEVETKIGRALLRGEIKPDGTISVTVDGGELAVAYAEPAFAAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 1e-104 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O5Y_27965 YP_008456131.1 ATP-dependent chaperone ClpB VFG2076 Protein 5e-115 42
O5Y_27965 YP_008456131.1 ATP-dependent chaperone ClpB VFG2084 Protein 2e-99 41