Gene Information

Name : O5Y_27395 (O5Y_27395)
Accession : YP_008456017.1
Strain : Rhodococcus erythropolis CCM2595
Genome accession: NC_022115
Putative virulence/resistance : Virulence
Product : iron-siderophore ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5950403 - 5951227 bp
Length : 825 bp
Strand : -
Note : COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components

DNA sequence : 
ATGACTACAGCTACTCCGTTATCGCGGCTACACGCCGAGAAGATCGAGCTCCGGTACGCCGATCGAACCATCGTGGACGA
GTTGAGTCTCGAGATCCCCGACGGCGGTTTCACCGTGGTCGTCGGACCGAACGGGTGCGGCAAGTCGACGTTGTTGCGTG
CGCTCGGCAGAATGCTCGCGCCGCGATCGGGTCGGGTTCTGCTCGACGGTAACGACATTCGGTCCTATCGCACCAAGGTA
GTGGCTCGGCGCATCGCTCTGCTGCCGCAGTCTCCGCTCTCACCCGGAGCGATCACCGTGGCAGACCTCGTGGCTCGCGG
CCGATACCCGTACCAGAGCATGCTGCGCCAATGGTCACCCGAAGACGAGCGTGTTGTCGCCGAAGCGCTCACTGAGGTCG
GAATGCGCGATGCAGCAGATCAATTGGTGGACGAACTGAGCGGTGGACAACGGCAGCGGGTATGGATCGCCATGACACTC
GCGCAGCGCACCCCGGTGTTGTTGCTCGACGAACCGACCACCTTTCTCGACATCGCCCACCAGATCGAGGTTCTCGACTT
GTGTTCCCAACTGCACCAGTCCGGTCGAACGTTGGTCGCGGTCCTGCACGACCTGAACCTCGCGGCTCGATATGCCACGC
ACGTAGTTGCCATGCGGTCCGGAAAAATCGTCATGCAGGGCAGTGCCTCGGACGTCTTCACCCCTGAGTTGCTGCGTGAA
GTGTTCGACCTCGAGGCTCTGGTCCTCGAAGACCCCGAAACCGGACGGCCACTTGTTGTTCCGCGTGATCGAAGACCTGC
CAGTCAGCTACCCGTCCACAACTGA

Protein sequence : 
MTTATPLSRLHAEKIELRYADRTIVDELSLEIPDGGFTVVVGPNGCGKSTLLRALGRMLAPRSGRVLLDGNDIRSYRTKV
VARRIALLPQSPLSPGAITVADLVARGRYPYQSMLRQWSPEDERVVAEALTEVGMRDAADQLVDELSGGQRQRVWIAMTL
AQRTPVLLLDEPTTFLDIAHQIEVLDLCSQLHQSGRTLVAVLHDLNLAARYATHVVAMRSGKIVMQGSASDVFTPELLRE
VFDLEALVLEDPETGRPLVVPRDRRPASQLPVHN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-60 50
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 8e-61 50
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 8e-61 50
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 8e-61 50
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 8e-61 50
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-51 46
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 8e-61 46
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 8e-61 46
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-52 46
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 6e-54 45
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 6e-54 45
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 6e-54 45
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 6e-54 45
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 2e-36 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O5Y_27395 YP_008456017.1 iron-siderophore ABC transporter ATP-binding protein BAC0164 Protein 1e-51 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O5Y_27395 YP_008456017.1 iron-siderophore ABC transporter ATP-binding protein VFG0925 Protein 2e-70 54
O5Y_27395 YP_008456017.1 iron-siderophore ABC transporter ATP-binding protein VFG1042 Protein 1e-51 46