Gene Information

Name : O5Y_24365 (O5Y_24365)
Accession : YP_008455412.1
Strain : Rhodococcus erythropolis CCM2595
Genome accession: NC_022115
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5321211 - 5321897 bp
Length : 687 bp
Strand : -
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGACCACAGTCGAAAAAACCACTACCGGACTGGTATTGACCGCTGTCAGTCTTCGATTCGGTGACGGTGACTCCACAGT
GCTCGCCCTCGACAACGTGGACCTCGAGGTCACGGGCGGCGAACTCGTCGCGATCGTCGGGCCGTCAGGGGCTGGAAAGT
CGAGCTTGCTCGCTGTGGCAGGTGGACTCGGTCGGCCGTCGAGTGGAACGATTGTCATCGACGGCGTCGACGTGTCGGCG
ATGCCGGCCCGTGCATTGGCCAAACTTCGACGAGACAAGGTCGGCTTCGTCTTTCAATCCGGCAATCTGATTCCAGCGCT
GACGGCGCGCGATCAGCTTCGGCTGATTCCCAAGCTCACGGGGCGGCCTGGGCGCGATCCCGAGGAATTGCTCGACTCGG
TCGGTATGAGCCACCGTGCGGATCGTCGACCTGGTCAACTCTCCGGCGGCGAACGACAGCGCGTCGGTATCGCTCGGGCA
TTGATGAGCAATCCCTCGCTACTGCTTGTCGACGAGCCGACGGCTGCTCTCGACCGAAAACGTAGCCATGAGGTGGTTGA
ACTGCTCTCGCGCGAAACTCACGAGGCCGGCGTCGCTACGATCATGGTGACCCACGATCACGACGTGCTCGGGCACTGCG
ACCGCATCCTCGAAATGGTTGACGGTCGATTGCGTCAGAGCGAGTAA

Protein sequence : 
MTTVEKTTTGLVLTAVSLRFGDGDSTVLALDNVDLEVTGGELVAIVGPSGAGKSSLLAVAGGLGRPSSGTIVIDGVDVSA
MPARALAKLRRDKVGFVFQSGNLIPALTARDQLRLIPKLTGRPGRDPEELLDSVGMSHRADRRPGQLSGGERQRVGIARA
LMSNPSLLLVDEPTAALDRKRSHEVVELLSRETHEAGVATIMVTHDHDVLGHCDRILEMVDGRLRQSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-35 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-36 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-36 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-36 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O5Y_24365 YP_008455412.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 4e-35 46
O5Y_24365 YP_008455412.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-38 42
O5Y_24365 YP_008455412.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 9e-37 41
O5Y_24365 YP_008455412.1 ABC transporter ATP-binding protein BAC0600 Protein 9e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O5Y_24365 YP_008455412.1 ABC transporter ATP-binding protein VFG2059 Protein 1e-17 41